Carya illinoinensis (pecan): 122315909
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Entry
122315909 CDS
T08745
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cill03032
]
122315909
03400 DNA repair and recombination proteins [BR:
cill03400
]
122315909
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
122315909
DNA replication proteins [BR:
cill03032
]
Prokaryotic type
DNA Topoisomerases
122315909
DNA repair and recombination proteins [BR:
cill03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
122315909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
122315909
NCBI-ProteinID:
XP_042988164
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All DBs
Position
1:34380521..34431064
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AA seq
964 aa
AA seq
DB search
MNLSYSLWDPSSMALSSGLRFSSILLRYRPSLPLASTLFSNSLPHRRSELRFLSSSPSSS
SPPSRTLRSAAIKSRRSDNAEGDEGQDGNGSVLVKGGVGNAGGDGGRVVPSELHKEATEA
YMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPH
GDTAVYDSLVRMAQDFSLRCPLINGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLE
QDTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIH
NPEATLQELLEYMPGPDFPTGGLIMGNIGILEAYRTGRGRVTVRGKTDVEVLDSRTKRAA
IIIKEIPYQTNKSALVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLN
NLYRLTSLQSGFSCNMVGILDGQPKLMGLRELLQAFLDFRCSVIERRARFKLSQAQERRH
IVEGIVVGLDNIDGVIRIVREASSNAAASAGLRNEYNLSEKQAEAILDMNLRRLTLLERK
KFVDESKSLMEQISKLEELLSSKKHILQVIEQEAIELKNKFSSPRRSMLEDSDSGQLEDI
DVIPNEEMLLVLSEKGYVKRMKPNTFNLQNRGTIGKSIGKLRVNDAMSDFIVCRAHDHIL
YFSDKGIVYSARAYKIPECTRTAAGTPLIQILSLTDGERITSVIPVSDFAGDQFLLMLTM
NGYVKKVSLSSFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVTLTSCETI
RAQGRNTRGAVAMRLKGEDKIASMDIIPAAIRKDLEMVTEANPSSSKRLSGPWLLFLSES
GFGKRVPLSSFRASPLNRVGLIGYKFSAEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGT
ANRIKVRDVSIQSRYARGVILMRLDHTGKIQSASLISATDTDPEEETASEAAAVHGQVSL
GASA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttcctactccctctgggacccttcttccatggctctctcttctggactccgc
ttctcctcaatcctactccgctaccgcccttcgctcccccttgcctcgaccctcttctcc
aacagtctcccccacagacgctccgagctccgttttctctccagctccccctcctcttcc
tcccctccgtctcgtacccttcggtcggctgccattaaatcgaggcgcagcgacaatgcg
gagggagatgaggggcaggatggcaacggtagcgtgctagtcaagggcggagttggaaac
gccggtggtgatggtggtagagtcgtgccatccgagctccacaaggaggccacggaggcc
tacatggcctacgccatgtcagtcctcctcggccgcgctttgcccgacgttcgcgatggt
ctcaagcctgttcaccgtcgaatcctatttgcaatgcatgaattgggcctttcatcacga
aagccattcaagaaatgtgctagagttgttggagaggttctaggaaaatttcacccacat
ggagacaccgctgtctatgattccttagtgcgaatggcacaggatttctccttacgatgt
ccactaatcaatgggcatgggaattttggttcaatagatgctgatcctgctgctgccatg
cgttatacagagtgtaggttggaggcactcacagaagcaatgttattggcagatttagaa
caagatacagttgattttgtgccaaactttgataattcacagaaggaaccatcacttcta
cctgctcggcttccaactttgttgttgaatggttcttctgggattgcggttggcatggca
accaacattccccctcataatcttggggagttggtagatgttctctgtgcattgattcat
aatcctgaagctacactgcaagaattgctggaatacatgcctgggcctgattttccaact
gggggactgattatgggaaacattggcatcttagaggcttatcgaactgggcgtggacgt
gttacagtcagagggaaaactgatgttgaagtgcttgattctagaacaaaacgagctgct
attatcataaaagagattccttatcagaccaacaaatctgccctcgtggagaagatagct
gaacttgtggaaaataagagcttagatggaataagtgatattcgggatgaaagtgatcga
tctggaatgcgtattgtcattgagctaaagcggggatcagacccattgattgtcctgaat
aatctttaccgcctcacatctcttcagtctggtttcagctgcaacatggttggaattctt
gatggacaacctaagctgatgggtctgagggaactactacaggcattcttagattttaga
tgctccgtcattgagagacgtgctaggtttaagctttctcaagcacaggaaagaaggcat
atagttgagggtattgttgtcgggcttgataatattgatggagtaattcgtatagtaagg
gaagcttcaagcaatgcagctgcatcagctggtttaaggaatgagtataatctttcagaa
aaacaagctgaagctatactggacatgaaccttagaagactcacccttcttgagagaaaa
aagtttgttgacgaaagtaaatcgttgatggaacaaatatctaagttagaggaactttta
tcaagcaagaagcacatattacaggtaatagagcaagaagcaattgagcttaaaaacaag
ttttccagtcctaggcgttcaatgttggaggactctgatagtggacaactcgaggacatt
gatgttattccaaatgaagaaatgctattggtgcttagtgaaaaaggttatgttaagcgg
atgaagcctaacacctttaatcttcaaaatcgtggaacaattggtaaatccattggaaag
ctgagagtaaatgatgccatgtcagactttattgtttgtcgagcacatgaccatatcctg
tatttcagcgataagggaatagtgtactctgctcgtgcatataaaattccagaatgcact
cggactgctgctggcacaccactcattcagatcttatctttaactgatggtgagagaata
acatctgttattcctgtgagtgattttgctggagatcagtttttattgatgctcaccatg
aatggctatgtcaagaaagtatctttgagttctttctcatccatcaggtcgactggaatc
attgcaattcagctggttcccggggatgagttaaagtgggtccgttgttgtacgaatgat
gaccttgtggccatggcttcacagaatggaatggtcactctaacctcctgtgagactatt
cgagcacaaggccgaaatactaggggtgcagtggccatgagactaaaaggagaggataag
atagcaagcatggacattataccagcagctatacggaaagacttggaaatggtgacagaa
gctaacccaagcagcagtaaacgcctcagtggcccatggctgttgtttctgtccgaaagt
ggttttggaaagcgggtgccgttgagcagcttccgtgcttcacctttgaacagagttggt
ttgattggatacaagttttcagcagaggatcgcttggctgcagtgtttgtggttgggttt
tcattagcggaagatggtgaaagtgatgaacaagtggttcttgttagccaaagtggtacg
gctaacagaattaaggttcgggatgtttcaatacagtctcgctatgcaaggggagttatc
ttgatgcggctagatcacactggaaagattcagtctgcatctctaatctcagcaacagat
actgaccctgaggaagaaacagcttctgaagctgctgcagtacatggccaagtttcactg
ggagcatctgcatag
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