Carya illinoinensis (pecan): 122315928
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Entry
122315928 CDS
T08745
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122315928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122315928
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122315928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
122315928
NCBI-ProteinID:
XP_042988208
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Position
7:complement(37639542..37641834)
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AA seq
330 aa
AA seq
DB search
MDSDEAKLFVGGISRVTSEDILKKHFGKYGTVLGCSIAKDRITKNPRGFGFVWFSESSAA
DKALHDPHVILGKTVDVKKAIPRSEQQQLQNQQQNRGLSKSSSTDNGDNQFRTKKIFVGG
LSASLTEEEFKNYFERFGKVTDVVVMHDSTTHRPRGFGFITFDSEEAVVNVMQNSFHELN
GRLVEVKRAVPKEANNGSDNGFNMRIEGRGGPPGNYPPYSPGYWILPGYAPFPGFSSGGG
SLYGAGIYGGWYPTGGSGGIGSAVAPLAPRSSWYGPRGSVGRVFPLPHSSGSIYAGYLSG
GVGVMSMAAGGYNGIVGQSELETESGSWWQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggactctgatgaagcgaagctcttcgtcggaggaatctctcgggttactagcgaagac
attctgaaaaaacatttcggcaaatacggcactgtattgggctgctccatagcgaaggac
cggatcaccaagaatcccagagggtttggattcgtttggttctccgaatcatctgcagct
gataaagcccttcatgatccccatgttattctgggaaagacggtagatgtgaaaaaagca
ataccccggagtgaacaacaacagcttcaaaaccaacaacagaataggggattgagtaag
agtagtagtactgacaatggcgataatcagtttaggactaaaaagatttttgtagggggt
ttatcagctagtctaactgaggaagagtttaagaattactttgagaggtttggtaaggta
acagatgtagttgtgatgcatgacagcacaacccatcggcctaggggctttggctttatc
acctttgattcagaggaggctgtggtgaatgttatgcagaatagctttcatgagctgaat
ggtaggcttgtggaggtcaagagggcggtgccaaaagaggcaaataatggtagtgacaat
ggttttaacatgagaattgagggtagaggagggcctcctggcaattaccctccttatagt
cccggatactggattctcccaggttatgcaccttttcctgggtttagcagtggtggaggt
tctctttatggagcaggcatttatggtggttggtaccctacaggtggatctggtggcatt
ggttctgctgttgctccacttgccccaagaagttcttggtatggccccagggggagtgtt
ggcagggtgttcccgttgcctcacagcagtggttcaatttatgctgggtacttgagtggt
ggagttggagttatgagtatggctgccggtgggtacaatgggattgttggacagagtgaa
ttggaaactgaatctggttcttggtggcaatga
DBGET
integrated database retrieval system
