KEGG   Carya illinoinensis (pecan): 122316001
Entry
122316001         CDS       T08745                                 
Name
(RefSeq) cyclin-T1-3 isoform X1
  KO
K15188  cyclin T
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122316001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cill03021]
    122316001
Transcription machinery [BR:cill03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122316001
    Brd4/P-TEFb complex
     122316001
    7SK RNP complex
     122316001
SSDB
Motif
Pfam: Cyclin_N Cyclin_C CycT2-like_C Cyclin_C_2 TFIIB
Other DBs
NCBI-GeneID: 122316001
NCBI-ProteinID: XP_042988332
LinkDB
Position
7:35868060..35872664
AA seq 441 aa
MPQQGISRAAGSMCLPEEPHCDIRKWYFSRKEIEDHSPSRKDGIDLEYESHLRESYCKFI
QRLGEKLKVPQVKIASGMLLCHRFYMRQSHAKNDWQTIATASTFLACKIGDTPRFLKDVV
LLSYEMMYEWDRLAPQRIRKEHKLYDKQRELILIGERLLLSTIAFDLDIQLPYQPLVAGL
KKLDLSNLAKVAWNFVNDTLRTTLCLQYKPHYIAAGSIFLAATALESMELLTKKKNFWWL
EFEISPKQLKEVIQHMMLTLKQNIKQVPPATRGRITQSVAPVQKAMVNGQNPGGGSAADC
SSSCSNLVEAGGVRSNKSQNLERGDCHLSVKEALPSKTNDNGCDGGTVEDQSQVKPKTVE
SDQRSSYQIFPNQNNHIKIDTNRIREALKRKRRGTAADMKFAEATNSEMDSEAWIERELE
NGIELEYSSLAKKQREEVVSF
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcctcagcaggggatttctagagctgcaggaagcatgtgcttgccagaagagcctcat
tgcgatatacgtaagtggtatttcagtagaaaagaaattgaagaccattccccctccagg
aaggatggaattgatttggagtatgagtcgcatttgcgggagtcatactgcaaatttatt
caaaggcttggcgagaagcttaaagtgcctcaggtgaaaatagcaagtggaatgttgttg
tgccaccggttttatatgcgtcaatctcatgctaagaatgattggcagacaattgctact
gcgagcacatttcttgcttgcaaaattggggacacaccgcgcttcctgaaggatgttgtt
cttctgtcttatgagatgatgtacgaatgggatcgtttggccccgcaaagaataagaaaa
gaacataaactatatgataagcagagggaactaatcttaatcggggagaggcttttgttg
tcaacaattgcttttgatcttgatattcaacttccataccagcctcttgttgctggtctg
aagaaattggatctctctaaccttgctaaagtagcatggaattttgtgaatgacacgctt
cggacaacattgtgtttgcagtacaagcctcattatattgcggccggttccatctttctt
gctgccactgctttagaaagtatggaattgcttacgaagaagaaaaatttttggtggctg
gagtttgaaatttcaccgaaacagttaaaagaggtcatccagcatatgatgctcacgttg
aagcaaaacataaaacaagtgccaccagccacacgtgggaggatcactcaatctgtagct
ccagttcaaaaggcaatggttaatggccaaaaccctggtggaggctcagctgctgattgc
tcttctagctgtagtaacctggtcgaggctggaggtgtaaggtctaataaaagccagaat
ctggaaagaggtgactgccatctttctgttaaagaagctttaccatctaagacaaatgat
aatggctgtgacggtggtactgttgaggaccagagtcaggtcaagccaaaaacagtagaa
tctgatcagaggtcaagctaccagattttccccaatcaaaataaccatattaagattgac
actaaccggatcagagaggcattgaaacggaagagacgtggcactgctgcggatatgaag
tttgctgaagccacaaattctgagatggatagtgaggcgtggatagagagagagctggaa
aatggaatagagctagaatattcctctttagcgaagaaacagagagaagaggttgtgagc
ttttga

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