Carya illinoinensis (pecan): 122316021
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Entry
122316021 CDS
T08745
Name
(RefSeq) chaperone protein ClpB4, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cill03110
]
122316021
Chaperones and folding catalysts [BR:
cill03110
]
Heat shock proteins
HSP100
122316021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
AAA_18
AAA_7
AAA_28
Mg_chelatase
Zeta_toxin
RNA_helicase
AAA_24
TniB
NACHT
NBD_SMAX1
AAA_23
ResIII
Torsin
bpMoxR
AAA_25
Motif
Other DBs
NCBI-GeneID:
122316021
NCBI-ProteinID:
XP_042988374
LinkDB
All DBs
Position
7:43307037..43315338
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AA seq
980 aa
AA seq
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MESRRASRLAISLLAAASKSARLPPSLPRAYALSASTCSFWYNSATALSRPSIFRRLSDS
DVSSAKFLGDTFMRRQFHSSTPSSYSATSSSQANQSEFTEMAWEGIIGAVDAARLNKQQV
VESEHLMKALLEQKDGLARRIFTKAGLDNTSVLQATDDFISKQPKVIGDTSGPIIGAHLS
NLLDEARKHKKEMRDDFVSVEHLVLAFHSDKRFGKQLFINLQLSEKDLKDAVTAVRGSQR
VTDQNPEGKYQALEKYGNDLTELARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEP
GVGKTAIAEGLAQRIVRGDVPEPLLNRRLISLDMGSLVAGAKFRGDFEERLKAVLKEVTA
SNGQIVLFIDEIHTVVGAGATSGAMDAGNLLKPMLGRGELRCIGATTLTEYRKYIEKDPA
LERRFQQVFCDQPSVEDTISILRGLRERYELHHGVKISDSALVAAAVLADRYITDRFLPD
KAIDLVDEAAAKLKMEITSKPTELDEIDRAVIKLEMEKLSLKNDTDKASKERLSKLENDL
ALLKQKQKELTELWEHEKVLMTRIRSIKEEIDRVNQEVESAEREYNLNRAAELKYGTLMT
LQRQLDVAEKDLAEFRKSGHSLLREEVTDLDIAEIVSKWTGIPVSNLQQSERDKLVKLEE
VLHKRVVGQDMAVKAVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALASYLFN
TENALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHH
DVFNILLQLLDDGRITDSQGRTVSFTNSVVIMTSNIGSNYILETLSTKDSKEAVYEIMKN
QVIELARQTFRPEFLNRIDEYIVFQPLDSNEINKIVEIQLNRLKERLKQKKIDLHYTKEA
LELLGKLGFDPNFGARPVKRVIQRLVENEIAMGILRGEFNEDDSVVVDADPSDKDIPPHK
RLLIKKLDRDSVMDAMVAND
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccgaagagcttcgaggctcgctatttcccttttagcggccgcctctaaatcc
gcaagactcccaccctcactgcctcgtgcctacgctctctctgcttccacttgtagtttt
tggtataattccgccactgctttgtctcgcccctcgattttccgcagattatcggatagc
gatgtctcttcggctaagtttctgggcgacactttcatgcggcgccagttccactcttcg
actccctcctcctactcggccaccagctcttctcaggctaatcagtcagagttcactgag
atggcatgggagggaattattggtgctgttgatgcagcacggcttaacaaacaacaggtg
gtggaatcggagcatttgatgaaagctctcctggagcaaaaggatggcctagccaggaga
atattcacaaaggcaggacttgacaacacgtcagttctgcaggctacggatgattttata
tctaaacaaccaaaagtgataggtgacactagcggccctataattggcgcacatctcagt
aacctcctggatgaagctcgaaagcataagaaagaaatgagagatgattttgtgtcagta
gagcatcttgtattggcattccattctgacaagaggtttgggaagcaattatttatcaat
ctccaactcagtgagaaggatttgaaggatgctgttactgctgttcgcggaagtcagaga
gtaactgatcagaatcctgaagggaaatatcaggcattggagaaatatgggaacgacttg
actgaacttgctcggcgaggcaaacttgatcctgttataggtcgagatgatgaaattcgg
cgctgtatccagatattatgtaggagaacaaaaaacaatcctgttattattggtgaacct
ggcgtggggaagactgcaattgctgaaggattggctcaacggattgtgcgtggggatgtt
ccagaaccactgttgaaccggaggctaatctccctagatatgggttcattagttgctggt
gccaagtttcgtggagactttgaggaaaggttgaaagctgttttgaaggaggtcactgct
tcaaatgggcagattgttttattcattgatgagatccatactgttgttggtgcaggtgct
acaagtggtgcaatggatgctgggaacttgttgaaaccaatgcttgggcgaggtgagctt
cggtgtatcggagcaactacattgactgagtaccgaaaatacattgagaaggaccccgca
cttgaacgtagatttcaacaagtcttctgtgatcaaccatctgttgaagacacaatatcc
attctacgtgggttgcgtgagcgttatgagctgcaccatggtgttaaaatatcagacagt
gctcttgttgcagcagcagttcttgctgatcgatacatcacagaccgttttttgcctgat
aaagccattgatcttgttgacgaggctgctgcaaagctgaaaatggaaatcacttctaag
cctacagagctggatgagatagacagagctgttataaagttggagatggagaagctttca
ttgaaaaatgacactgataaagcatctaaagaaaggttaagcaagctagaaaatgatttg
gctttgcttaaacaaaaacagaaagaactaactgaactgtgggaacatgaaaaggttctc
atgacacgaataagatcaattaaagaagagattgatagagttaaccaagaggtggaatct
gctgagcgtgaatataacctaaatcgtgcagctgaactcaagtatggaactctaatgacc
cttcaacgccaattagatgtggcagagaaggaccttgctgaattccggaagtctggacat
tctttgcttcgagaagaggtcactgatcttgatattgctgagattgttagcaaatggacc
ggtataccggtatcaaatcttcaacaatcagagagagacaagctagtcaagctggaagag
gttcttcacaagagggtggttggtcaagacatggcagttaaagcagttgcagatgccatc
cgacgctcaagggcaggactgtccgacccaaatagacccatagcaagtttcatgttcatg
ggccctactggtgtggggaaaacagagcttgcgaaagccttagccagttacctctttaac
acagaaaatgctcttgtcagaatagatatgagtgagtacatggagaagcatgcagtttcg
cgactcgttggggctccacctggttatgttggttatgaagaaggtgggcagctaactgaa
gtggttcgtcgaaggccatattctgtagtcctctttgatgaaatagagaaagcacatcac
gatgtcttcaacattttgttacaattgttggatgatggaagaataaccgattctcaagga
agaacagttagtttcacgaattctgttgtgataatgacttcgaacattggctccaattat
atacttgagactcttagcacaaaggatagcaaggaagcagtttatgagataatgaaaaat
caagttattgaattggctagacaaacctttcgcccagaatttttgaatcgaattgatgag
tatattgtgttccagcctctggactccaatgaaataaataagattgtcgagatacagctg
aatcggttgaaggagaggctgaagcagaagaaaatagatcttcattacacgaaggaagct
cttgagcttcttgggaaattaggctttgacccaaactttggagcgaggccggtaaagagg
gtgatacagaggttggtggagaatgaaatagcaatgggcatcttgagaggagagttcaat
gaagacgactcggtggtagttgatgccgatccatcagacaaagacattcctccccataaa
agattgctcataaagaaattggacagagactctgtaatggatgccatggttgctaatgac
tga
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