Carya illinoinensis (pecan): 122316038
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Entry
122316038 CDS
T08745
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122316038
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
122316038
NCBI-ProteinID:
XP_042988419
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Position
7:complement(38461461..38467683)
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AA seq
700 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALSAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKHSL
AHLDSSLRSLGTFLVTKKSTDSISSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEVLT
AQGIDVRSFNSDLLYEPWNVNDAHGRPFTTFASFWERCLSMPYDPEAPLLPPMKIISGDV
SRCPSDALAFEDESEKASNALLARAWSPGWSNADKALTIFINGPLIEYSKNRRKADSVTT
SFLSPHLHFGEVSVRKVFHIVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH
PYSHERPLLGHLKHFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGREFDRIDNPQFQGYKFD
TNGEYVRRWLPELARLPTEWIHHPWNAPESVLEAAGIELGSNYPLPIVEIDAAKTRLQEA
LLEMWQQEAASRAANENGTEEGLGDSTDSAPFAFPQDILMEENHEPVRSNPHATVRRYED
QMVPSMTTSSVRVEEEEPSSDLRVAVDITGQVPTNVNVNQEAMRNSLNQVVLQTVQRDNL
AQFDPSIVFQSASEASTAESSSSSRRERDGGVVPVWSPSTSNYSEQLVGDENGMGNSSSY
LQSHPQSHQIVNWRRLSQTGLRKWMPTCNWFSYSHILKFM
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtgggtgtagcatagtctggttcagaagagatctgagagtagaggataac
ccagcactgagtgctggagtgagagcaggtgctgtggttgcagtcttcatatgggcacct
gaggaggaaggtcactactacccaggcagggtctccaggtggtggcttaagcacagtctg
gctcaccttgattcctctttgagaagccttggcacttttctcgtcaccaagaaatccacc
gactccatttcttctctactcgaggttgtcaaggccactggtgctactcaactcttcttc
aaccacttatatgatcctttgtcacttgttagagatcaccgggcaaaggaggttttaact
gcacaagggatagatgtacgctccttcaattcggatttgctgtatgaaccatggaatgtt
aatgatgcccatggccgccccttcacaactttcgcctccttttgggaaagatgccttagc
atgccttatgatccggaggcaccacttctcccacctatgaagataatttcaggtgatgta
tcaaggtgcccatcagatgcattagcatttgaagacgaatcagagaaggcaagcaatgca
cttcttgctcgagcatggtcaccagggtggagcaatgctgataaggctttgactatattc
atcaatggaccattaatagagtattctaaaaatcgcaggaaagctgatagcgtcacaacc
tcatttctctctccccacttgcattttggggaggtgagtgtacggaaagtgtttcatatt
gtccgtatcaagcaggttctatgggccaatgaaggaaacaaggctggtgaagagagtgtc
aacttatttctgaagtctattggacttagagaatattcaagatacttgagttttaaccat
ccatacagtcatgaaaggccacttcttgggcaccttaagcacttcccttgggttgtgaat
gaaggttactttaaggcatggagacaaggtagaactggctatccattggtggatgctggg
atgagagagttatgggccactggatggttgcatgatcggatacgagtggtggtttctagt
ttctttgtgaaggttcttcaacttccttggagatggggaatgaagtatttctgggataca
ctcttggatgcagatcttgagagtgatgctcttggatggcagtatatatctggtactatc
cctgatggccgtgaatttgaccggatagataatccacagtttcagggttacaagttcgat
actaatggagaatatgtaagacgttggcttcctgaactagccaggctaccaactgaatgg
atacaccacccatggaatgcaccagaatccgtcctcgaagctgctggaattgagctgggt
tcaaattatcctcttcccattgtagagatagatgcagctaaaaccagattgcaagaagca
ctattggagatgtggcagcaagaagcagcctcaagagctgcaaatgaaaatggaaccgag
gaagggcttggtgactccactgattctgccccatttgcctttcctcaagatatacttatg
gaggaaaatcatgagccagtgagaagcaacccccatgctacagttcgccgctatgaggat
cagatggttccaagcatgactacttcttcggtgagagtggaagaggaagaaccttcttca
gatcttcgagtggcagtagatatcacaggtcaagtgccaacaaatgtaaatgtaaatcaa
gaagcaatgaggaactcgttaaaccaagtagttcttcagaccgttcaaagagacaatctg
gcacaatttgatccttcaatagtgttccagagtgcttctgaagcttccacagcagaatct
tctagtagtagtaggcgagaaagggatggaggtgtagttccagtttggtctccttcaact
tctaactactcagagcagttagtgggtgatgaaaatggcatgggaaatagttcatcatac
ttgcagagccatcctcagtctcaccaaatagttaattggagacggctatctcaaaccggt
ttgagaaagtggatgccaacatgtaattggttcagctactctcatatactgaagtttatg
taa
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