KEGG   Carya illinoinensis (pecan): 122316064
Entry
122316064         CDS       T08745                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122316064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cill03400]
    122316064
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     122316064
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_DCAF4 RAWUL Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_WDR75_2nd PAN2_N WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 122316064
NCBI-ProteinID: XP_042988489
LinkDB
Position
7:1101303..1115896
AA seq 764 aa
MHRVGSAGNTNNSSRPRKEKRLTYVLNDADDTKHSAGVNCLAVLKSVGTDGCDYLFTGSR
DGTLKRWDLMEDSATCSTTFESHVDWVNDAVLAGDNTLVSCSSDTTLKAWNCLSGGTCTR
TLRQHSDYVTCLAAADKNSNIVASGGLGGEVFVWDLEAALVPLSKSGDAMEDDCPNGVNG
SGNLLPITSLRTISSSNSISMHTNQSQGYVPLAAKGHKESVYALAMNDSGTLLVSGGTEK
VVRVWDPRTGSKTMKLRGHTDNIRVLLMDSTGRLCLSGSSDSMIRLWDLGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDDSIWVAT
TDSSINRWPAEGCNPQKVFERGGSFLAGNLSFSRARVSLEGSTPVPVYKEPTLSIPGTPG
IVQHEILNNRRNVLTKDTSGSVKLWEVTRGIVVEDYGKVSFEKKREELFEMVSIPTWFTV
DTRLGSLSIHLDTPQCFSAEMYSADLGIVGKPEDDKVNLARETLKGLLAHWLAKRKQRVG
SQPSANGDVLSGKDVSHRSIAHSRIEVDCNAENDAMVYPPFEFSTVSPPSIITEGSHGGP
WRKKITDLNGTEDEKDFPYWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSA
PRILRIQKVINYVVEKMVLDKPSESVNPEGTFTPGLVGGQLTHSVIGDGSYRSGVKPWQK
LKPSIEILCNNQVLSPDVSLATVRAYVWKKSEDLVLNYRLIQGG
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgcaccgtgtgggtagtgcggggaacacaaacaattctagtcgccctcgtaaggagaag
agattaacatacgtgttaaatgatgctgatgacacaaagcattctgcaggtgtgaattgt
ttggctgtattaaagtcggtaggaaccgatgggtgtgattacctcttcactgggagccgt
gatgggacacttaaaagatgggatttgatggaagattcagccacctgctctactactttt
gagtctcatgtggactgggttaatgatgctgttcttgcaggtgacaatacacttgtttcc
tgttcctcagataccacccttaaggcatggaactgtttgtctggtggaacatgtacaagg
actctccggcaacactcagactatgtgacttgtctcgctgctgcagataaaaatagcaat
attgttgcctctggtggccttggaggggaggtttttgtatgggatcttgaggctgcgctt
gttccactctcaaagtccggtgatgcaatggaagatgactgtccaaatggtgtcaatggt
tcagggaatttgctcccgattactagtttgcgtactataagctcaagcaatagcatttct
atgcatacaaatcagtcccaaggatatgttccacttgctgccaaaggccataaggagtct
gtttatgctttggcaatgaatgatagcggcacacttcttgtctccggtggaactgagaag
gttgttcgtgtttgggacccaagaactggttcaaagactatgaaattacgaggtcatacg
gataacattagggttttgcttatggattctactggaaggctgtgtttatcgggatcttct
gactctatgatcagactttgggatcttggtcagcagcgatgtgtgcattcctatgctgtg
catacagattctgtttgggcacttgccagtactccaacatttagtcatgtttatagcggt
gggagagacctttctttgtacttgacagacttggcaacaagagagagtcttttgctctgc
acaggggagcaccccattctgcaattggctttacacgacgatagtatctgggttgcaaca
acagattcttccatcaatagatggcctgctgagggatgtaatcctcaaaaggtctttgaa
agaggtggttctttcttagccggaaacctatccttttcgcgggcaagggtttccttagag
ggatctacccctgttcctgtttacaaagaaccaacacttagcattcctggaactcctgga
atagtgcagcatgaaattttgaataatagaaggaatgtgttgactaaggatacctctggt
tcggtgaagctgtgggaggtcaccaggggcattgtggttgaggattatggaaaggtgtca
tttgagaagaaaagggaagagctctttgagatggtaagcattcctacgtggttcactgtg
gataccaggcttggaagtttatctatccatttggacaccccacaatgcttctcagctgag
atgtactcagctgaccttggcattgttggtaaacccgaggatgataaggttaatctagct
cgagaaacccttaaaggacttttggctcactggttggccaaaagaaagcaaagagttgga
tcccagccttctgctaatggggatgtgttatctgggaaggatgttagccacagaagtatt
gctcattcaagaattgaagttgattgtaatgctgagaatgacgcgatggtgtatcctcca
tttgaattttcaactgtttcccctccttccatcattactgagggttctcatggaggtcca
tggagaaagaaaattactgatttaaatggaactgaagatgagaaagattttccttattgg
tgtctggactgtgtgttaaataaccgcctacctcccagagaaaatactaagtgcagcttt
tatttacatccatgtgaaggttcagctgttcagattctgacccaaggaaaactaagtgca
cctcgtatactgaggattcaaaaagtaattaattatgttgtagaaaagatggttcttgac
aaaccctcggagagtgtaaatcccgagggaacatttactcctggacttgttggagggcag
ttaactcattcagtgattggggatggatcttatcggtctggagtgaagccttggcaaaag
ctcaaaccttctatagagatattgtgcaacaatcaggtcttgtccccagacgtgagctta
gccactgtgcgggcttatgtgtggaagaaatctgaggaccttgttctcaattatagactc
atccagggtgggtga

DBGET integrated database retrieval system