Carya illinoinensis (pecan): 122316080
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Entry
122316080 CDS
T08745
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122316080
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cill01002
]
122316080
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122316080
Enzymes [BR:
cill01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122316080
Peptidases and inhibitors [BR:
cill01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122316080
Ubiquitin system [BR:
cill04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122316080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
122316080
NCBI-ProteinID:
XP_042988539
LinkDB
All DBs
Position
1:complement(34978944..34990667)
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AA seq
1002 aa
AA seq
DB search
MGKKVKKKSRGPLKEKRVAAHSPKKVPQQSDPSPETVGDEVSVVRERKPCFHLEKGVDLS
KLSARIGSSEPIMCEDCRVDGKGSKGKGKHGKKKSGAAVDSISDSRPIWVCLECGHYACG
GVGLPTGPQSHTVRHVRQTHHPLVIHFEKPQLCWCFLCKTLIPIVKMEENGDHKNVLSDV
VKLIKGRSSEGSSVDVEDVWFGGGSVTSEIKAGSSVPIDLDLGVNYVIRGLVNLGNTCFF
NSVMQNLLAMNMLRDYFFQLDTSSGPLTIALKKLFIETKQEGGLKNVINPRSFFGCVCSK
APQFRGYQQHDSHELLRCLLDGLSTEELGSKKQHKSPKGDGISSNPSTFVDAVFGGQISS
TVCCVECGYSSTVYEPFLDLSLPVPTKKPPSKKAQPVTRAKKTKLPPKKGGKTRPKVNKD
ADLLPAQSVSNLAASNDISCHEQAVEAVAEKAMAFSCTSMPLSSSDLIVVAGESGSASHN
VLAVQASENEQVFENVVEQTSALLNDFTWLDYIDPETVSDECHLTQSNGVSITQDPENKD
IYLNDAPLQVSSDSSSQTFSANVEPNPKPDSSVNYWEDELPLQVQDTDVLLLPYKEGSPT
TGEIIRGDEASSSVAGYGPDELDFDGFGDMFNEPEITMGPAPRPSFDNVVAETVVVGNNS
DSDPDEVDNTDSPVTVESCLAQFIKPELLSNENAWHCENCSKTLQHERLRAKRQLKNAST
VWLNGDQIGSQNEQLLCPAEVGNLANGYIKNEASLEDAGEILILHKAKMDCAQIENGQTG
ELNPFVSQWEEGTGVIKGALPEKLHSSGCYKTCHQESFCGQAIESCNVHARNSVEYTTGK
VHHGESLSLAQSCESEGSEDEDMNSKSVKVKRDATKSVLIYKAPPILTIHLKRFSQDARG
RLSKLNGHVSFRERIDLRPYLDPRCIDKEKHHYRLIGVVEHSGTMRGGHYVAFVRGGQKS
RGNYQKENEGSVWYHASDAYVRQASLDEVLGCEAYILFYEKI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagtcaagaagaagagccgaggtcctctgaaggagaagcgggttgcggcc
cattccccaaaaaaagttccccaacaatctgaccctagtcctgagactgttggtgatgaa
gtttcagtagtaagagagagaaaaccatgttttcatcttgaaaagggcgttgatttgagt
aaactgtcagctagaattgggtcttcagaacctattatgtgtgaagattgtagggttgat
ggtaaggggagtaagggaaaaggtaaacatgggaagaagaaaagtggggctgcagttgat
tctatatcggactcgagacccatatgggtttgtttggaatgtgggcattatgcctgtgga
ggggttggactcccaacaggccctcaaagtcacaccgttcggcatgttaggcagactcat
caccctttggtaattcatttcgagaaacctcaactctgttggtgctttctttgcaaaaca
ctcattccgattgtgaagatggaagagaatggcgaccataaaaatgtcttatcagatgtt
gtgaagttgataaaggggcgatcatcggaagggtcctctgtggatgttgaggacgtttgg
tttgggggtggcagtgttacaagtgaaattaaagcaggaagcagtgtaccaattgatttg
gatttaggtgtcaattatgtgataagaggtctggttaatcttgggaatacttgcttcttc
aattcagtcatgcaaaatcttttagccatgaatatgttgagggattattttttccagttg
gacacttctagtggcccccttacgattgctttgaagaagctctttattgaaaccaagcag
gaaggaggattgaaaaatgtgattaatccaagaagcttttttggttgtgtctgttcaaag
gctccacagtttaggggataccagcagcatgacagccatgaattgctccgttgcttactt
gatggtttatctaccgaagagttgggctcaaaaaaacaacataagtccccaaagggagat
ggcatttcttcaaatccaagtacttttgtggatgctgtatttgggggccaaatatcaagt
actgtttgttgtgttgagtgtgggtactcttcaactgtgtatgagccctttttagacctt
tccctgccagttccaactaaaaaacctccatccaaaaaggcacaaccagtcactcgagca
aagaaaactaagctgccacccaagaaaggtggaaagactcggcccaaagttaacaaagat
gcagatttattaccagctcaaagtgtgtcaaacctagcagccagcaatgatatttcctgc
cacgaacaggctgttgaggctgttgcagaaaaggcgatggcgttttcgtgtacttctatg
ccattaagttccagtgacctaatagttgtggctggtgaaagtggttcggcttcacataat
gtcttagctgttcaagcttctgaaaatgagcaagtctttgagaatgttgtagagcaaaca
tcagctttattgaatgattttacatggttggattacattgatccggagactgtatcagat
gaatgtcatttgacacaaagcaatggtgtttcaataactcaagatcctgaaaacaaggat
atatatctgaatgacgcaccattacaggttagctctgattctagcagtcagactttttca
gccaacgtggagccaaatccaaagccagattcttcggtgaattattgggaagatgagctg
ccattacaggttcaagataccgatgtgctgttgctgccatataaagaaggaagtcccact
actggggagataatcagaggggatgaagcatcctcatcagttgcgggctatggaccagat
gaattggactttgatggctttggtgacatgttcaacgagcctgagattactatggggcct
gccccaaggccctctttcgataacgtggttgcagaaactgttgttgtaggaaacaacagt
gattcagatccagatgaagttgataatacagattctccggtgactgttgagagttgtttg
gctcaatttataaagccagagcttctctcaaatgaaaatgcttggcattgtgagaattgt
tcgaaaactctccaacatgagaggttgagagcaaagaggcagctgaaaaatgcgtcgaca
gtttggctgaatggagatcagattggcagccaaaatgagcaactgctctgtcctgctgaa
gttggaaacttggcaaatggttatattaaaaatgaggcttctcttgaagatgctggtgaa
atcttgattttacataaagcaaaaatggattgtgcacaaatcgaaaatggtcaaacaggc
gagctgaatccatttgtttctcaatgggaagaaggaacgggtgtgataaaaggtgcactt
ccagagaaattgcattcttcaggttgctataaaacttgtcatcaagaaagtttctgcggt
caagcaattgagtcatgtaacgttcatgctcgaaatagtgtggaatataccactggtaaa
gtgcatcacggtgagtccctgtcgttggctcaaagctgtgaatctgagggaagtgaggac
gaggatatgaattccaaaagtgtaaaggtgaaaagggatgccaccaaaagcgttctcatt
tacaaggccccgcctattctcaccattcatcttaaaaggtttagccaagatgctcgtggc
cgcttaagtaaattaaacggacacgtcagtttcagagaaaggattgaccttaggccgtat
ctggatcccaggtgtatagacaaagagaaacaccattatcgcctaattggagtagtggag
cattcggggaccatgagaggaggccactatgttgcatttgtgagagggggtcagaagagc
agaggaaattatcagaaagaaaatgagggttctgtgtggtatcatgccagtgatgcctat
gtgcggcaggcttccctggatgaagttcttggttgcgaggcctacatattattctatgaa
aagatttga
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