Carya illinoinensis (pecan): 122316693
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Entry
122316693 CDS
T08745
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122316693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122316693
Spliceosome [BR:
cill03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
122316693
Complex B
122316693
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
122316693
NCBI-ProteinID:
XP_042989350
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Position
7:complement(29951684..29954368)
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AA seq
244 aa
AA seq
DB search
MAEVPTGTEVPPNVTIYINNLNEKIKLEELKKSLHAVFSQFGKILEVLAFKTLKHKGQAW
VVFEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHEDKGRK
KKEQHDANQPGIGLNPAYAGAYGATPPLSQIPYPGGTKAMVPEAPAPPNSILFVQNLPHE
TTPMMLQMLFYQYAGFKEVRMVETKPGIAFVEYGDEIQSTAAMQALQGFKITQQNPMLIT
YAKK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggttcctacaggcactgaggtccctccgaatgtgactatatacatcaacaac
ctcaacgagaaaatcaagctcgaagagttgaagaagtcgctgcacgctgtgttctcgcag
ttcgggaagatactggaagtgctcgcgttcaagacgctgaagcacaaaggtcaagcttgg
gtggttttcgaggaagtttcctccgcctccaatgcgcttcgccaaatgcagggcttccct
ttctacgacaagccaatgagaatacaatatgcaaagacaaaatcagacataatagccaag
gctgatggtacttttgttccacgggaaagacgtaagaggcatgaggataagggaaggaag
aaaaaggagcaacatgatgctaatcaacctggaattggtctgaatcctgcttatgctggt
gcttatggtgcaacacctcctctttctcagataccttatccaggtggcacaaaggctatg
gtaccagaggcacctgctccaccaaatagcatactgttcgtgcagaatcttccccatgaa
acaactccgatgatgctgcaaatgcttttctaccaatatgctggttttaaggaagttaga
atggtggaaacaaaaccagggattgcctttgtggagtatggagatgagattcaatctaca
gctgcgatgcaggcactccaaggtttcaagataactcaacagaaccctatgttgatcact
tatgcaaagaaatag
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