Carya illinoinensis (pecan): 122316756
Help
Entry
122316756 CDS
T08745
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122316756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122316756
03036 Chromosome and associated proteins [BR:
cill03036
]
122316756
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122316756
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122316756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
122316756
NCBI-ProteinID:
XP_042989456
LinkDB
All DBs
Position
7:41013310..41020583
Genome browser
AA seq
717 aa
AA seq
DB search
MLAFSSASADGASSTGELVPFSSEARATAVFPLHHGLKPPISRLSISWARGNSLRVSFFR
KPSGDDSDGDEFGGKVLEVRLSGGDGDMSDAQFRRIAYGSVSPFALLQSRRNSAVSLSKI
SSPYHVEWWEYVMEYSKDINSLLSDPKSLTSPAIEDPKAVLQKAEEPICLKAAWDVMEIF
YADKQSQSWLPERLVDWLAAYNGLLSSTQATIHSQLISFQKELVTLQVIEDSPKYWEVLS
AALAVGWLDVVVKMLRLHGSYQLDQIGNRETENGLVEAVAVLISKMPRLRPELQAGTLGE
CHRAKPDFIKAWEKWRAHITKLDCSAYWVRCDHDQTRKGLRNMLQIMLGNTNSLCTATCH
WMELYIAHFLYIRPFTVGLESMYSLARKCMQLKPMTISHRLIQLLLGIIGDNTEVVLAEC
SRAFGPWMVAHAIELLASGSDQAETLLREEHYNLGGISIEELHRLVYAQVLSSDALTWQI
APIYLTSCIKQGMGLLEILLSKQPVQDVQILLKVIEICRLYELDSVSSNIMKIAGVYHWK
HGRKGSGVFWLQQARDEVRLNRIAQQLFDFVGQSISDESFKQWEGLIELLGSESKTAGGL
EFLHKYRDFKKSLKQVNDGKTTDAAQQAVESLISLMKNPSTPQQFWLPILYDSLKLLSCQ
ERPLLNVSETNLLLNKLQELSMAKLRPDFIEADLPPQALGSVRLALATNLGRAIVEE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccttctcgtcagcctccgcagacggcgcctcatccactggagaactcgtgcct
ttttcgtcggaagcccgtgccaccgcagtcttccccctccaccacggcctcaagccaccg
atctctcgcctctccatctcctgggcgcgaggaaattccctccgcgtctcattcttccgg
aaaccatccggagatgactctgacggagacgaattcggcgggaaagtgttggaggtgagg
ctcagcggtggagatggagatatgagtgacgcgcagttccggaggatcgcgtacggttcc
gtctcaccgttcgcgcttcttcagagccggagaaactctgccgtcagcttgtcgaagatc
tcgtcgccgtatcacgttgagtggtgggagtacgtgatggagtatagcaaggacataaat
tcactgctcagcgatcctaagtcgcttaccagtccagcgattgaagatccaaaggccgtt
ttacagaaagctgaggagccaatctgtctgaaagctgcatgggacgtgatggaaatattt
tatgctgacaagcaatctcaatcatggctacctgaacgacttgttgattggttagctgct
tacaatggtcttctctcctcgacacaagcaacaatccattcacaactaatatcttttcag
aaagagcttgtcactttacaggttatcgaggatagtcctaaatattgggaagtattgtct
gcagcattagcagttggctggctggatgttgtggtgaaaatgctgcgcttgcatggatcc
tatcagcttgatcagattggtaatcgcgagacagaaaatggattggtagaagcagtggct
gttcttatttccaaaatgccacgtttgcgtcccgaactacaagctggaacgttaggtgaa
tgccatagagccaaacctgattttatcaaggcttgggagaaatggagggcacatattact
aagctggactgtagtgcatactgggttcgttgtgatcatgaccagacccggaaaggtttg
aggaatatgctacaaatcatgctgggaaacacaaacagtctttgcactgcaacgtgtcac
tggatggagttatacattgctcactttctatacataaggccattcacggtgggtttagaa
agtatgtatagcctagcccggaaatgcatgcagttaaaaccaatgaccatatcccatagg
ttgatacaacttctgcttggaattattggagataatactgaggttgtcttagctgaatgc
tccagagcatttggcccttggatggttgcacatgctatagagttgttggcttctgggagt
gatcaagcagagactcttcttcgtgaagagcattataacttgggtggaatcagcattgaa
gaactccaccgacttgtctatgctcaagttctatcttcggatgcattgacttggcaaata
gctccaatttatttgacatcatgcataaagcaggggatgggtttgttagagattctattg
agcaagcaacctgttcaagatgttcaaatactccttaaggtcatagagatatgccgtcta
tacgaacttgatagtgttagttcaaatattatgaagattgctggagtataccactggaag
catggaaggaaaggttctggagtattttggcttcagcaagctcgagatgaagttcgtctg
aacaggattgctcagcagttgtttgattttgtggggcaatcaatctctgatgaaagtttc
aagcaatgggaaggcttgattgaattgttgggttctgaatctaagactgctggaggtctc
gagtttctgcacaagtacagggattttaaaaaatcccttaagcaggttaatgatggaaaa
actactgatgccgctcagcaagctgtagaatctcttatatctcttatgaaaaacccttct
acacctcagcaattttggctgcctattctgtatgactcgttgaagctgctcagttgtcaa
gagcgccctctgctaaatgtctccgagaccaaccttttgttgaataaactgcaagagttg
tccatggcgaagctgagaccagacttcattgaagccgacctgccaccccaggccttaggc
tctgttaggctagctcttgctacaaatcttggacgtgctatcgtggaagaatga
DBGET
integrated database retrieval system
