Carya illinoinensis (pecan): 122316779
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Entry
122316779 CDS
T08745
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122316779
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
122316779
NCBI-ProteinID:
XP_042989493
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Position
7:27383864..27386636
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AA seq
578 aa
AA seq
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MTDEEILRMLEDTTKEASRHQLETLRSILERQAGVLYLRSHLQGHDEQPVDAATFRRAVP
LSSYDDYVDHIDRMADGLVDHDLPLLSVDTLLCFFYSSGTSAMKPKLIPYFDSKLSKAAS
FMAHQGSASILRRSFPPRTSVSKILWFIYADNIATTKGGFKVMAASTYPIHSGATNWSQF
LSCSSPREVILGSNVEHQMYCHLLCGLRNSDFIDGIRVPYAIGLIKVFGLLESKWKQLCD
DLECGVPSLEISDVAMRDSVIEVLGGPQPELSRRIWAICEDKNWGGIVSKLWPNVRFIRC
VTTGSLAQYYPKLKQYAGEVPVLGGDYFASECCVGINMDITQPPERTRFILLPTAAYFEF
LPFASDVTDVVSEETVDISGVEAGKMYEVVVTTYRGFYRYHLGDIVRVVGFYNSSPLVEF
VMRAPRAPSEVVTEKDLLLAIEYFQSVLRSAMAVEITEFSSFLDLTLSPKLLKVYIEVRE
ECMFLPKEKIEELVVILKECGSSIGDSLGDKYNVQRKRGEIDPLVVSIVKPGSFDALSQL
AIENGAPATQYKPPKIIRNHQIVDFIEKRILVTVSLDG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgaggagatcttgaggatgctcgaggataccacgaaggaagcctcacgtcac
cagctcgagaccctccggtcgatcctcgaacgccaggccggagtactttatctcagatcc
cacctccaaggccacgatgagcaaccggtggacgccgccaccttccgtcgcgccgtgccg
ttgtcttcctacgatgactacgttgaccacatcgatcggatggccgacggactcgttgac
catgatctgcctctcttgtccgttgatactctactctgtttcttctacagctcagggaca
agtgccatgaagcccaaattgatcccttactttgattctaagctctcaaaagcggcttcc
ttcatggctcaccagggcagcgcctcaattcttcgaaggtcgtttcctcctaggacctca
gtgagtaagatcctatggttcatttatgccgataacattgcaaccaccaaaggtggtttt
aaggttatggccgcttctacatatcctattcatagtggtgccacaaattggtctcagttt
ctatcttgttctagtccccgcgaagtcattcttgggtcgaatgtggagcaccagatgtac
tgccaccttctttgtggtcttaggaactctgattttattgatggaattagagtcccgtat
gccataggcttgatcaaggtgtttggtcttttagagtccaagtggaagcagctatgtgat
gatcttgaatgtggggttccaagtttggagatttctgatgttgcaatgagagattcagta
attgaagttcttggggggcctcaaccagaactgtcaagaagaatttgggcaatttgtgag
gacaagaattggggtgggatagtgagtaaactgtggcctaatgtaaggttcattaggtgc
gttaccacagggagcttggctcagtattatccaaagcttaagcagtatgcaggagaagta
cctgtgttaggtggagactactttgcttcagaatgttgtgtgggtattaacatggatatt
acgcagcctccagagaggactcgattcattttgctcccaactgcagcatacttcgagttt
cttccatttgcttcagatgtgactgatgtggttagtgaagaaacagtagacatttctggt
gtagaggcagggaagatgtatgaagtggttgtcaccacttatagaggattctatcgatat
catctaggtgatattgtgagagttgttggtttctataattcatctccgctagtggagttt
gtgatgagagctcctagagctccttccgaggtagtaactgagaaagatttgttacttgca
atcgaatattttcaaagtgtgttaagaagtgcaatggcggtggagatcacagaattctcg
agtttcttggacttaactttgagcccaaagctcctgaaggtttacatagaagttagagag
gaatgcatgtttctgccaaaggaaaagattgaggagctagttgttattcttaaagagtgt
ggttcctctattggggatagcttgggagacaaatacaatgtgcagaggaaaagaggtgag
atagaccctttggtagtatccatagtaaagcccggtagctttgatgcattatcccagtta
gctattgaaaatggagcaccagctactcaatataaaccgcccaagattataagaaatcac
caaattgttgacttcattgaaaaacgtattcttgttactgtatctttggatggttaa
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