Carya illinoinensis (pecan): 122316785
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Entry
122316785 CDS
T08745
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122316785
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122316785
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122316785
NCBI-ProteinID:
XP_042989504
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Position
7:complement(6473778..6481466)
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AA seq
922 aa
AA seq
DB search
MHTPMDDPSPCSSISDQSNDGVSSTLERKASFNNRDRPKRLQIKLLPGQVSFRFLIHVSD
VGRLLCNNGAVVSRIRRETSTRIHCEAVDPGSNLRVVLVVGFGPRDGRDVSSAQEAVLRV
FESVSEKVGDGGWDVACWKMLAHTSQVGAVMGRGGQNIRRVRTETGAQIRILPAPHWTAE
DDVLIQITGDLSAVKKALVDVSSSLQDCPPFDKAPTHMTRPLEDSPYGACPESQAHPIHV
SSSLPLPLPQNSGTSASHGDTSPLSLPRYAERVVCDKDKKDSPQQEVVFRMLCSDHAAGW
VIGKRGAIVKALQNEAGASIMFAAPTNESGDRVVTISAWENLESSQSPAQNAVILVFTRM
IKGVIERGSLSGSSEGRPVMAKLLVVSDLVGCLGGNDGKVLSELREVTGADIRIVEREHI
LTCGSVNDTVVQITGDYRSVENALFQVTSSLRDNQLRAKYPYVRSSEDPSRTDTVPSNIG
AISSPPRLQLPQITGSISAMKKALIEVSTSLQDYLPIDKAPTPLTRSLGGSSYGSSPDPH
AELLPHLSSPLPPLPGNSGNMALNGNISLPRHADVVVSGQDGKGTEQEVVFRMLCSNHAA
GCVIGKRGFIVRALQNEAGASISFAAPLTEYGERVVTISAFENLESSYSPAQNAVGRVFA
RIIEGFIEKGFLSGLGDSRAVTAKLLVASDFVGHLSGNGGKLLSEMRRATDADIRILEGE
QILNCASMSDLVVQITGEFRSVQNALFQVTSSIRDYLLLSEVFREVTLKSPDLRLSEGHL
RNEAVPHNISAPSSPRFQLPQTAGRGQTTAISDNEGGFTTFRGDLELGRSVSCNINGNKL
ATVTATTVEIKISEHVFGSVYGEDGSNLDRIKQISGAKVEVHDPRPGEREGRVIISGTPD
KTFAAQSLLHAFIQSAKKTPYN
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcacacacctatggacgatccgagtccctgttcatcaatttcagaccaatcgaacgac
ggcgtttcctccacgctagaacgcaaggcttcgttcaacaaccgggatcgtcccaaacgc
ctacagatcaaactcttaccgggacaggtttccttccgcttccttatccacgtctctgac
gttggccgactcctctgcaacaacggcgccgtcgtctcccgtatccgccgagagacgtcc
acaagaatccactgcgaggcggtcgaccccggttccaaccttcgggtcgtcctcgtcgtt
ggatttgggccgagagatgggcgggacgtttcgagtgctcaggaggccgtccttagggtt
ttcgagagcgtatcggaaaaggtgggggacgggggctgggacgttgcttgttggaaaatg
ctagcgcacacgtctcaggttggtgcggtgatggggagaggagggcaaaacatcagaaga
gtgaggaccgagaccggtgctcagattaggatcttgccggctccgcattggactgccgag
gacgatgtattgattcagattacgggtgacctttcggctgtaaagaaagccctggttgat
gtttctagcagtctccaagattgtccaccgtttgataaagccccaacccatatgaccaga
cctcttgaggattctccctacggagcctgtcccgaatcacaggcacatcctatacatgtt
agttcatcgttaccgctgcctttgcctcaaaactcgggaactagtgcttcgcacggcgat
acatcaccgttgtccttgccgagatatgccgaaagagtagtctgcgacaaagacaaaaag
gactctccacaacaagaggttgtgttcagaatgctctgttccgatcatgcggctgggtgg
gtgattggcaaaagaggggccattgtcaaagccctgcaaaatgaagccggtgcatcaata
atgtttgcagctcccacaaatgagtccggtgatcgtgtggtcaccatttctgcttgggag
aaccttgaatcatcacagtctccagcacaaaatgctgtaattcttgtcttcactagaatg
attaagggtgtcattgaaaggggatctctatcaggctctagtgagggtagacctgtaatg
gctaagcttctagttgtatcagatttggttggttgtttgggtggcaatgatggtaaggta
ctttcagaattgagagaagttactggtgctgatatacggatagtggaaagggagcacatt
ttgacttgtggttcagtgaacgatacagtcgtacagattacaggagattaccggagtgtt
gagaatgctctgtttcaagttacttctagtctgagggataatcaattgagagcaaagtac
ccctacgtaagatcgagtgaagacccttctagaactgatactgttcccagcaacataggt
gctatttcttcaccaccgaggttgcagctgccacagattacaggcagcatttcagctatg
aagaaagcactgattgaggtttctacctctctccaagattatcttccaattgacaaagcc
ccaacccctttaaccagatctcttgggggctcttcctatggatcttctcctgatccacat
gcagagctgttaccacatcttagttcaccgttaccacctttgcctggaaattcaggaaat
atggccttaaatggcaatatatcattgccaagacatgctgatgtagtagtttctggccag
gacggaaagggtacagaacaagaagttgtgttcagaatgctgtgttctaatcatgcagct
ggttgtgtgattggaaaaagagggttcatagtcagagcgctgcagaatgaagctggtgct
tctatatcatttgcagctcctttaacagagtatggtgagcgtgtggtcaccatctctgcg
tttgagaaccttgaatcatcatactctcctgcacaaaatgctgtgggtcgtgtcttcgct
agaattattgagggttttattgaaaagggattcctgtcaggcttgggtgacagtcgagct
gtaacagctaagcttctagttgcatcagattttgttggtcatttgagtgggaatggtggt
aagctactttcagaaatgagaagggccactgatgctgatatacggatattggaaggggag
cagattctaaattgtgcttcaatgagtgatttagtagtacagattacaggagagtttaga
agtgtacagaatgctctgtttcaagtcactagcagtatcagggattatcttttactcagt
gaggttttcagggaagtgactttgaagtcccccgatttaagattgagtgagggccatctg
agaaatgaggctgttccccataacataagtgctccttcttcaccaaggtttcagctgcca
cagactgctggaagaggacaaacaacagcaatctcagacaatgaaggaggcttcacaacc
tttaggggggatttagagcttgggaggtcagtatcgtgtaacattaatggaaacaaacta
gctactgtgacagcaactactgttgagattaagatctctgaacatgtttttggctctgtt
tatggtgaagatgggagcaacttggatcgaataaaacagatttcaggagcaaaagtcgag
gtgcatgatcctcgtcctggcgaaagagaagggagggtcattatatcagggacacctgat
aaaaccttcgcagcccagagcttgcttcacgccttcatacaatctgcaaagaaaacacca
tataattga
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