Carya illinoinensis (pecan): 122316796
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Entry
122316796 CDS
T08745
Name
(RefSeq) nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122316796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122316796
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122316796
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
122316796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nairovirus_MLD
Motif
Other DBs
NCBI-GeneID:
122316796
NCBI-ProteinID:
XP_042989519
LinkDB
All DBs
Position
7:40838232..40845924
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AA seq
597 aa
AA seq
DB search
MVGSESPNGSSPQPARKYGITKPISLAGPTEADLHRNMELEKFLIDSGLYESEEEASRRK
EVLNRIDEIVKGWVKQLTHLRGYTDQMVEDATAVILTFGSYRLGVHGPASDIDALCVGPS
YVNRDEDFFMVLHDTLAEMEEVTELQPVPDAHVPVMKFKFLGISIDLLYASISLLVVPED
LDISHGSVLYNVDEPTVRSLNGCRVADQILKLVPNVEHFRMTLRCLKFWAKIRGVYSNVT
GFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFPVWH
PRRNPKDRRHHMPIITPSYPCMNSSYNVSASTLRVMVEQFHHGHSICEEIELNKGQWSAL
FEPYLFFEAYKNYLQVDIIAADSDNLLAWKGWVESRLRQLTLKIERDTNGMLQCHPFPNE
YVDTSKPCSHCAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIFVSH
VRRKQLPAFVFPDGYKRSRLSRHVSRQAEKTCEDAVGCWPGSTERPLKRKSDPGMVDVRP
DKPDKRVSISTELLESVSRSGGLSQVSFSEGVRLECVATGDVDSKSKIRLFDGQLRS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttctgaaagtcccaacggttcttcgccacagccggcgaggaagtacggtatc
acaaagccaatctctcttgcagggcccaccgaagccgatcttcaccgcaatatggaattg
gaaaagttcttgattgattcgggactatatgagagtgaggaagaagcttcgaggagaaaa
gaggttctgaaccgcattgatgagattgtaaaaggttgggtcaagcaattaacccacctg
aggggctacacagatcagatggtggaggacgcaactgctgtcattcttacttttggttcc
tatcgactgggggtacatgggcctgcgtctgacatcgacgcattgtgtgttgggccatct
tatgttaatcgagatgaagatttttttatggttttgcatgatactctggctgaaatggaa
gaagttacggagcttcagccagttccagatgctcacgtcccagtaatgaaattcaaattt
ctagggatatcaattgatcttctctatgcaagtatatctcttttggttgttccagaagac
ctggacatctcacatgggtctgttctgtacaatgttgacgagccaactgttcgaagcctt
aatggctgccgggttgcagaccaaattcttaaacttgttccaaatgttgagcacttccgc
atgacactcagatgtttgaagttttgggctaaaatacgaggtgtttattccaatgttact
ggattccttggtggtgtaaattgggcccttttggttgctagggtatgtcagctttacccc
aatgcaattcctagtatgctggtttctcgattcttcagagtttatacacaatggcgttgg
ccaaatcctgtgatgttatgcccaatagaagagaatgaacttgggtttccagtatggcat
cctcgcagaaaccctaaggaccggcgtcatcacatgccaataataactccttcctaccct
tgtatgaattctagctacaatgtctcagcaagtactcttcgtgttatggtggagcagttc
caccatggtcatagcatctgtgaggagattgagctgaacaaaggccagtggagtgcacta
tttgagccctatctattttttgaggcatacaaaaactatttacaagtggatataattgca
gctgattctgataatctgcttgcttggaagggatgggtggagtctcgacttagacagctt
accctgaagatagagagggatacaaatgggatgctgcaatgccatccttttccgaatgaa
tatgtagacacgtcaaaaccatgttctcattgtgctttcttcatgggcttgcagaggaaa
gagggagttagaggtcaagaaggccagcaatttgatatacgtggaacagttgatgagttt
aggcaagagatcaatatgtacatgttttggaaaccaggaatggatatttttgtttctcat
gtccgtcgaaagcagcttcctgcttttgttttccctgatggttataaacgttctcgattg
tctaggcacgtaagccggcaggctgaaaaaacttgtgaagatgctgtggggtgctggcct
ggctctactgaaaggcctctcaagaggaaaagtgatcctggaatggtggatgtgaggccg
gataaaccagataagcgagtttctattagcacggaactgctggagtctgtttctaggtct
ggtggattatctcaggtcagcttcagtgaaggggttagattagagtgtgtagcaactggg
gatgtcgatagcaaatctaaaattaggttatttgatggacagttaaggagttaa
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