Carya illinoinensis (pecan): 122316830
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Entry
122316830 CDS
T08745
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122316830
Membrane trafficking [BR:
cill04131
]
Autophagy
Other autophagy associated proteins
Others
122316830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
BCAS3_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
WDR55
Beta-prop_IFT140_2nd
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_RSE1_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
Ge1_WD40
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
122316830
NCBI-ProteinID:
XP_042989571
LinkDB
All DBs
Position
7:28976862..28981917
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AA seq
460 aa
AA seq
DB search
MATLSTFPSPPWPNSNPNPNSNPNPNFVTQEEQSIPLDSQNDSAISFRSIDYQSIGSHGD
EPDDHDHDQNANPNIYKAFPAPYDPPTLEPHGHGRNENPNPNIPKPLDPPTLLHLSFNQD
QGCFAVGTDCGFRIFNCDPFREIFRRDFDDGGISGVEMLFLCNILALVGGGPHPQYPPNK
VMIWDDHQGRCIGELSFRSDVRSVRLRRDRIVVVLEQKVYVYNFTDLKLLHQIETISNPK
GLCAVSQLAASLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTPDGQLLATSS
SKGTLVRVFNSIDGTLLQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHIFNLKVNPG
SPGIEKSRYASDSNLAVTQSSSSLSFIKGVLPKYFSSEWSVAQFRLPEGSHYIVAFGHQK
NTVVILGMDGSFYRCQFDPAIGGEMTQLEYHNFLKPEEAF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctctctaccttcccatccccgccctggcccaattctaaccctaaccccaac
tctaatccaaaccctaattttgtcactcaagaggaacagtctattcccctcgactctcag
aacgattcggccatctctttccgatcaattgattaccaatctatcggatcccatggcgac
gaacccgacgaccacgaccacgatcagaacgctaatcctaacatctacaaggcgtttccg
gcgccatatgatccgccaacgcttgaaccccatggccatggccgtaacgagaaccctaat
cctaatattcctaagccgcttgatccgccaactctgctccacctgtcgttcaaccaggac
caggggtgtttcgctgtgggtactgactgcgggttccggattttcaactgcgacccgttt
cgcgagatcttccgccgggacttcgacgacgggggcatctccggagtagagatgctcttt
ctgtgcaacatcctggctctcgtcggcgggggaccccaccctcagtacccacccaacaag
gtcatgatttgggatgaccaccagggccgctgcatcggcgagctatcttttcgctccgac
gtccgctccgtacggctgcgccgcgacaggatcgtagtcgtactggagcagaaggtctac
gtgtacaattttaccgacttgaagttgctccaccaaatcgagactatctcgaaccctaag
ggcctctgcgcggtatcccaactggcggcgtcgctggtcctggtctgccccgggttgcag
aagggacaggttcgggttgagcactatgcttcgaagagaaccaagtttatcatggcgcac
gactcgaggattgcctgcttcgcgctcacgcctgacgggcagttgctcgctacgtcgagc
tccaaggggactctggtccgggttttcaatagcatcgatggaacacttcttcaagaggtt
aggaggggtgcagatagagcagagatctacagcttagcattctcttcaacagcccagtgg
ttggcagtctcaagtgacaagggaaccgtccacatttttaaccttaaggttaatcctgga
tcacctgggattgagaagtcacgatatgcatctgattctaatcttgctgttactcaatca
agctcatctctctctttcattaagggagtgttgccaaagtattttagctcagagtggtcg
gttgcacagttccgcttgcctgagggttctcattacattgttgcttttggtcaccaaaaa
aataccgtggtaattcttggcatggatggaagcttctatcgttgtcaatttgacccggcc
attggaggagagatgacgcagctggaatatcacaactttctgaagccagaagaagctttc
tga
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