Carya illinoinensis (pecan): 122316876
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Entry
122316876 CDS
T08745
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122316876
Enzymes [BR:
cill01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
122316876
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122316876
Prokaryotic type
122316876
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
122316876
NCBI-ProteinID:
XP_042989639
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All DBs
Position
7:34221591..34224396
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AA seq
526 aa
AA seq
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MKSPDSKSDKYPPPTHKLETEQSEPEPKKLKMSTTTTDDDEDTSTATAAPETNKKQRYKR
RKIAIFFAYCGVGYQGMQKNPGAKTIESDLEEALFLSGAVPEQDRNNPKRYDWARSARTD
KGVSACGQVVSGRFYIEPPGLVERLNSNLSSQIRIFGYKRVTASFNAKKFCDRRRYVYLI
PVFALDPSSHPDRESVLASLGSGNELVKCLECSERGRKVVGLMGKRIFESKGTVESGITS
SSGDAIEESNIKEESRAYLENGENHKFNSESIEEAKVVDDSRASEIAAVEAEIPAKNVDT
DAKVNLQEGAKGGGYFYGEKERENFNRILKYYVGTHNFHNFTTRTKAEDPAAQRFIVSFN
ANATVTVQGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIEKALQKDVNINVP
TAPEVGLYLEECFFTSYNQKWKDSHEEVSMKAYEEEAEDFKMKHIYSHIASTEHKEGAVA
LWLHSLNHRNYPDLRVVGSEDISDGRCGEMENAVKSRESHENLTVS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcccagactcaaaatccgacaaatatccgcctccgacacataaacttgaaact
gaacagtctgaacccgaacccaagaaactgaaaatgtcaaccacaaccaccgacgatgac
gaagacaccagcaccgccactgcggctcccgaaaccaacaaaaagcaaagatacaagcgc
cgcaagattgcgatattctttgcctactgcggcgtaggctaccaaggaatgcaaaagaac
ccaggtgccaaaaccatcgaatccgatcttgaagaagcgctgttcctctccggtgcggtc
ccggaacaggaccgcaacaatcctaagcgctacgactgggcccgctctgcccggactgac
aagggggtcagcgcatgtggacaggttgtgtcaggccggttctacatcgagccgcctggc
ctcgtcgagcggcttaattcaaacctctcatctcagatccggatattcgggtacaagcgc
gtgacggcttcgtttaacgccaagaagttctgcgatcggaggaggtatgtgtatttaata
cccgtttttgcgctcgatccctcttcgcatcccgatagagagagcgttttggctagtttg
ggatctgggaatgaactcgttaagtgcttggaatgttctgagagaggccgcaaggtcgta
ggtttaatgggtaagcgtatttttgagtctaagggtactgttgagtcaggcattacgtcg
agcagtggggatgctattgaggaatccaatatcaaagaggaaagtagggcttatttggaa
aatggtgaaaatcataagtttaattctgaatctatagaggaagccaaggttgtagatgac
agtagagcttctgaaattgctgcggttgaagctgaaattcctgccaaaaacgtggatact
gatgcgaaagtaaacctgcaggagggtgcaaagggaggtgggtatttttatggtgagaag
gagagggaaaatttcaatagaattttgaagtattatgtggggactcataacttccataac
ttcaccaccagaacaaaagccgaggaccctgctgctcagcgctttattgtttcattcaac
gcaaacgctacggttacagtccagggtatcgagtttgtcaagtgtgaggttgtggggcag
agcttcatgcttcatcagattcggaagatgattgggcttgccgtggctatcatgagggat
tgtgctccggagtcactgatagaaaaagctttgcagaaggatgtcaacattaacgttcct
actgctcctgaggttggtttgtacttggaagagtgcttcttcacgtcatataaccagaaa
tggaaagacagtcatgaagaggtgtccatgaaagcatatgaagaagaggcagaggacttc
aaaatgaagcatatatactctcatatagcctcaacggagcataaagaaggagccgtggcc
ctctggttgcattctctcaaccaccgtaattatccagatttacgtgtcgtcggcagtgaa
gacataagtgacgggagatgtggtgaaatggagaacgcagtcaagtcaagggaatcacat
gaaaatttgacagtttcatag
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