Carya illinoinensis (pecan): 122316898
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Entry
122316898 CDS
T08745
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122316898
Enzymes [BR:
cill01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122316898
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122316898
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
122316898
NCBI-ProteinID:
XP_042989671
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Position
7:9460088..9466186
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AA seq
633 aa
AA seq
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MKIVTYNVNGLRSRISQFGSLPKLLDSFDADIICFQETKLRRQELTADLAVADGYESFFS
CTRTSDRGRMGYSGVATFCRVKSAFSSTEVALPIAAQEGFTGLVENSHNRKCEARNEIVD
DLEDEFAKEELLKVDSEGRCIITDHGHFVLFNLYGPRAECNDDERIQFKLTFFKILQKRW
ESLLRQGRRIIVVGDLNIAPTAMDCCDAGPDFETNEFRRWFRSILAESGGPFSDIFRTKH
PDRREAYTCWPQNTGAEVFNYGTRIDHILCAGSCLHEDHDQQGHNLMTCHVEECDILIQY
KRWKPGNTVRCHVCVLCMLPCRWKGGRSIKLEGSDHAPVFTRLLEIPDTSEHSTPALSAR
YIPMIHGVQQTLVSILTKRQLAEQIRSCEMSGSLSNENITSETCNERVKRSSNDCSISGV
SPVESCSSNQESEGLISNRAEHSRGFDGDASCNILVMSGSKQSKSLPRNETMKKARKSQG
SQLSLRSFFQRSPNPINNAKDSNSGISMSQTDVLQSGNHSDTSSAVDVQCSVSQQDALNS
STPTQDDHELSSYPLEREKTNAALLEWRRIQQVMQNSIPLCKGHSEPCVARVVKKQGPNF
GRRFYVCARAEGPASNPEANCGYFKWAASKSGH
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtaacgtataacgtgaatgggcttagatcgcgcatttctcagttcggctcc
ctccccaaattgctcgattccttcgatgccgatatcatttgctttcaggagaccaagtta
agaaggcaggagctgacggcggatttggcagtggcggacggttacgaatcgttcttctcc
tgcacgcgtacgtccgatagaggccgaatggggtattccggggttgctactttttgtcgt
gtaaagtcagctttttcgagcaccgaagtggccctgccgattgcagctcaggaaggcttt
acgggacttgttgaaaactctcataatagaaaatgcgaagcacgcaatgaaatagtggat
gaccttgaggacgagtttgccaaagaggagcttcttaaagttgacagcgaggggcgatgc
attatcacggatcatggtcattttgttctgtttaacttgtatgggcctcgagctgaatgc
aatgatgatgaaaggatccagtttaagctcacgtttttcaagatattacagaaaaggtgg
gagtctctcttgcgccagggaaggaggataattgttgttggtgatctcaacattgcaccc
actgcaatggattgttgtgatgctggaccagatttcgagacaaatgaattcagaagatgg
tttagatccatactagcggaaagtggaggccctttttctgatatttttagaacaaaacat
cctgacagaagagaagcatacacatgctggccgcaaaatacaggtgctgaagtgtttaat
tatggcacaagaattgatcatattctgtgtgctggatcatgcttacatgaagatcatgac
cagcaaggtcataaccttatgacttgccatgtggaggagtgtgacatactgatacagtac
aaacggtggaaacctgggaatacagttagatgccatgtatgtgtactctgcatgttgccc
tgcaggtggaaaggagggcggagcatcaagctggaaggttctgatcatgctcccgttttt
acaagattactggaaattcctgatacttctgaacacagtactcctgctttatctgctaga
tatattcccatgattcatggcgtccagcaaactcttgtgtcaatcttaacaaaaagacaa
cttgctgaacaaattagatcctgcgagatgtcaggttcactttcaaacgaaaatataacg
tcagagacttgcaatgagagagtgaagaggtcatccaacgactgcagtatatctggtgta
tcccctgttgaatcttgttcttcaaaccaagaatctgaaggtctcatttctaatagagct
gagcattccagaggttttgatggtgatgcttcttgtaacatcttggttatgtcaggaagt
aagcagagcaaatcacttccaagaaatgaaaccatgaaaaaggcaagaaaaagtcaaggg
tcccaactctcattgaggtcatttttccagagaagtccaaaccctatcaataatgctaaa
gactctaatagtggtatttcaatgagtcagacggatgtcctacagtctggtaatcactct
gatacaagttctgcggtggatgttcaatgcagcgtttcccagcaggatgcattgaactca
agtacacccactcaggatgatcatgaactaagttcctatcctttggagagagagaaaact
aatgctgctttactggagtggcgaaggatacagcaagtcatgcagaatagcatacccctt
tgtaagggacacagtgaaccatgtgttgcacgggtagtgaagaaacaaggtcctaatttt
ggtcgcagattttatgtctgtgctcgtgccgagggacctgcctcaaatcctgaagcaaat
tgtggttacttcaaatgggctgcttcaaaatctgggcactga
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