Carya illinoinensis (pecan): 122316934
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Entry
122316934 CDS
T08745
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122316934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122316934
04147 Exosome [BR:
cill04147
]
122316934
04090 CD molecules [BR:
cill04090
]
122316934
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122316934
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122316934
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122316934
CD molecules [BR:
cill04090
]
Proteins
122316934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
RsgA_GTPase
Zeta_toxin
DUF87
AAA_21
AAA_15
AAA_30
DUF815
AAA_25
AAA_7
AAA_24
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
122316934
NCBI-ProteinID:
XP_042989731
LinkDB
All DBs
Position
7:32109588..32117275
Genome browser
AA seq
1293 aa
AA seq
DB search
MEIESGLNEKPNLRESASLRQNVEATKSPDMIGDIEGSEKSGGDQSTKTVPFLKLFSFAD
SRDVCLMIVGIIGAIGNGLGLPLMTILFGELINVLGSNQHNKDVVRVVSKVCLKFVYLAA
GIGVAGFLQVACWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVERMSGDTVLI
QDAMGEKVGKFVQLLSTFIGGFFVAFFKGWLLTLVLLATIPLLVASGGIMSIVISKTASR
GLGAYANAANVVEQTISSIRTVASFTGEKQAVANYKKFLVTAYKSGVQEGLASGLGFAMV
MLVMFSSYGMAIWFGSKMILEKGYTGGDVLNVIMAVMTGSMSLGQASPCMSAFAAGKAAA
YKMFETIERKPEIDAYDTRGKVLNDILGDIELRDVYFSYPARPDEQIFGGFSLYIHRGTT
TALVGQSGSGKSTVISLIERFYDPQAGVVLIDGINLKDLQLKWIRGKIGLVSQEPVLFAS
SIKDNIAYGKDGATYEEIRSAAELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIA
RAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIH
RGKIVEKGSHSELVKDPDGAYSQLIRLQEENKESGQAVDDQNKFEISMESFRQSSLRNSQ
RNSFFRSLSRGSSVNSSGRRSFSVTAFGLPTEVAIDDNVMAIREEKLPKVSIRRLAYLNK
PEIPILLLGAIAAIINGAILPIFGILLSRVINSFYKPPHQLKKDTNFWALIFVVLGVVSF
LAIPARAYLLSVAGSKLVERIRLMCFEKLVRMEVGWFDEPEHSSGTVGARLSADAATVRA
LVGDALGQILHVIASAIAGLVIAFVASWQLAFIVLALIPLIGINGYIQVKFMKGFSADAK
MMYEEASQVANDAVGSIRTIASFCAEEKVMDLYRTKCEGPRKAGIRQGLVTGIGFGTSFG
MLFLVYATSFYAGARLVAVNKATFSDVFQVFFALTMAAMGVSQTSSMGPDTGKANDAAAS
IFAIIDRKSKIDPCDESGMTLDNLKGEIELRHVSFKYPSRPDIHIFRDLSLVIRSGKTVA
LVGESGSGKSTVVSLLQRFYDPDSGCITLDGIEINKFQVKWLRQQMGLVSQEPILFNDTI
RANIAYGKEGNAIEAEITAVAELANAHSFISGLQQGYDTIVGERGVQLSGGQKQRVAIAR
AMIKSPKVLLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKN
GVIVEKGKHETLLKIKDGYYASLVSLHTSASTA
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggagatagagagtggattgaatgaaaagccaaatctgcgtgagtccgcctcattgaga
caaaatgtagaagcaaccaaaagccctgacatgattggtgatatagaaggctcggagaag
agtggaggagatcagagtaccaaaactgttccatttctaaagctgttctcgtttgcagat
tccagagatgtttgcttgatgattgtaggcataataggtgccattggaaatgggttgggt
ctgccccttatgacaatactctttggagaactgattaatgtgttgggaagtaaccagcac
aataaggatgttgttcgtgtagtttccaaggtttgtctaaaattcgtctacttggcagct
gggattggtgttgcaggattcctccaggtggcttgctggatggtcacaggagagagacaa
gcagcacgaataaggggtttgtatttgaagactattttgagacaagatgtggctttcttt
gataaagaaacaaacactggagaggttgttgagagaatgtctggtgacactgttcttata
caagacgccatgggtgagaaggttgggaaatttgtgcagctactatcaacattcatcgga
ggcttttttgtagcatttttcaaagggtggctccttacccttgtcttgctagccacaatt
cctcttcttgtggcctctggtggcattatgtctatcgtcatatccaagacagcttctcgt
ggactgggtgcttatgcaaatgcagcaaatgtggttgaacagacaattagttcaatcaga
acagtggcatcatttactggagagaagcaagctgtagctaattacaaaaagtttctagta
acagcttacaaatctggtgttcaggaaggcttggcttctggacttggttttgctatggtt
atgttagtcatgtttagtagctatggtatggcaatatggtttggatctaagatgatactt
gaaaaaggatacactgggggtgatgtgttgaatgtgatcatggctgtgatgacaggatct
atgtccctaggccaagcatctccctgcatgagtgcctttgctgctggtaaagctgcagca
tataagatgtttgagactattgagaggaagccagagattgatgcttatgacacaagggga
aaagttttgaatgatattcttggagatatagagttgagagatgtttactttagttatcca
gcaagaccagatgaacagatattcggtggattctctctttatatccatagaggcacaacg
acagctttggttggacaaagtggaagtgggaagtcaacagtgatcagtctaatagagaga
ttctacgatccacaagccggtgtagttcttatagatggcattaacctaaaagacctccaa
cttaaatggattagggggaaaattggtcttgtcagccaagaacccgtgttgtttgcatcc
agcatcaaggataatattgcttatggaaaggatggggcaacatatgaagagataagatct
gcagcagagcttgcaaatgcttctaaatttatcgataaattgcctcagggactggatacg
atggttggtgagcacggaacccagctatctggtggtcagaaacagagagttgccatagca
agagcaattctgaaaaacccgagaattctacttctggatgaagctacaagtgcacttgat
gcagaatctgagaggattgtgcaggaggcattggataggatcatggtcaaccgaactact
gtcattgttgcccatcgtttgagcactgtgaggaatgctgatatgattgcagtcattcac
agaggaaagatagtcgaaaaaggctcacattcagaactagtcaaggatcctgatggagca
tactctcaacttatacgcttgcaagaagaaaacaaggaatcaggacaagctgtagatgat
caaaacaaattcgaaatttctatggagtcgtttagacagtctagccttagaaacagtcaa
agaaattcattcttcagatccttaagtcggggatcatctgtaaatagtagcggccgccgt
tcattctcagtcacagcatttggtttgcccacagaagtggccatagatgataatgtgatg
gcaatacgagaagaaaaattgccgaaggtctccatccgccgccttgcctaccttaacaag
ccagagattccaattcttcttcttggggcaatagctgcaataattaatggcgcaatactc
cctatatttggtatattgctttcaagggtaatcaactcattctacaaaccacctcatcaa
cttaagaaggatacaaatttttgggcactaatttttgtggtcctcggtgtggtttcattt
ctggcaattccagcacgagcatacctcctttctgtggcagggagtaagttggtagaacgt
attaggttgatgtgttttgagaagttggttcgcatggaggttggatggtttgatgaacct
gagcactcaagcggcacagttggtgctaggctctcggcagatgctgcaacagtgcgtgct
cttgttggagatgctcttggtcagatacttcatgttattgcttcagcaattgcgggtttg
gtcattgcatttgttgcaagttggcagttggcgtttattgtccttgcattaattccgttg
attggaatcaatgggtacattcaagttaagttcatgaaaggattcagtgcagatgcgaag
atgatgtatgaggaggcaagccaagttgctaacgatgcagtcggaagtataagaacaatt
gcttctttctgtgctgaggaaaaggtgatggatctatacagaacaaaatgtgaaggccct
aggaaggcagggataaggcaaggcttggtcactggaataggatttggaacatcttttggc
atgttatttctggtgtatgctaccagtttctatgcaggagctcgactcgttgcggtcaat
aaagcaacattttcagatgttttccaagttttctttgctttgaccatggctgccatggga
gtttctcaaacaagctccatgggtccagatactggcaaagccaatgatgctgcagcttcc
atatttgcaataatagatcggaagtcgaagatagatccttgcgatgagtctggtatgaca
ttggataatctgaaaggggagattgagcttcgacatgtaagctttaaataccccagcagg
ccagatattcatatttttagagacctcagcttggtcattcgttctggcaaaacagttgcc
ttggttggagaaagtgggagtgggaagtccacagtcgtctcgttattgcaaagattttat
gatcctgattctggatgtattacacttgatggaattgaaattaataagtttcaagtgaag
tggttgaggcagcagatgggtcttgtgagtcaagaaccaattttgtttaatgataccatt
cgtgccaacattgcgtacggaaaggaaggaaatgcaattgaggcagaaataactgctgta
gcagaattagcgaatgctcacagcttcatcagtggcttgcaacagggttatgataccata
gtaggagaacgtggagtccaattgtccggcgggcagaaacaacgggtagccattgcacgt
gctatgatcaaaagtccaaaggtattactattagatgaggctaccagtgctctagatgcc
gaatccgaaagagtggttcaagatgcattagaccgagtcatggttaaccgaactacggtc
gtggtggctcatcgattatccacaatcaagaatgcagatgtaattgctgtggttaaaaat
ggagttatcgtagagaaaggaaagcacgagactttgcttaaaatcaaggatggctactat
gcctccttggttagtcttcacacaagtgcttcaactgcctga
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integrated database retrieval system
