Carya illinoinensis (pecan): 122316935
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Entry
122316935 CDS
T08745
Name
(RefSeq) ABC transporter B family member 11-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122316935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122316935
04147 Exosome [BR:
cill04147
]
122316935
04090 CD molecules [BR:
cill04090
]
122316935
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122316935
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122316935
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122316935
CD molecules [BR:
cill04090
]
Proteins
122316935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_16
Zeta_toxin
AAA_21
AAA_30
DUF5906
AAA_15
AAA_24
DUF87
DUF815
AAA_7
IIGP
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
122316935
NCBI-ProteinID:
XP_042989732
LinkDB
All DBs
Position
7:32177156..32185995
Genome browser
AA seq
1297 aa
AA seq
DB search
MEKMNGLDGKTNIQEAAALKRRVKAKKIPNMIGDADDHLEKKGGGGDHHQNTKSVPFLKL
FSFADSSDIFLMIVGTIGAIGNGLGLPLSTILFGQMINALQVDKDVVRVTSEICLKTLYL
AAGIGAAGFLQVACWMVTGARQAARIRGVYLKTILRQDVAFFDKETNTGEVVGRMSGDTV
LIQDAMGEKVGKFLQLVSTFIGGFVVAFLKGWLLTLLLLASVPLIVTSGGLMYIAISKTA
SRGQDAYTNAANAVEQTISSIRTVASFTGEKQAVNNYKKFLLTTYKSGVQEGFVSGLGFG
LVTFVIYCCYAMAVWFGAKMVLYKGYTGGDVLNVMMSLLTGSASLGQASPCMSAFVAGKV
AAYKMFETIERKPKIDAYDTKGKILDDVRGDIELRDVFFSYPTRPDLQIFSGFCLSIQSG
TTAALVGQSGSGKSTVISLIERFYDPQAGKVLIDGINLKDLQLNWIRGKIGLVSQEPVLF
ACSIRDNIAYGKDGATTEEIRVAAELANAAKLIDALPQGLETTVGAHGTQLSGGQKQRIA
IARAILKDPRILLLDEATSALDVESERIVQEALDRIMVNQTTLIVAHRLSTVRNADMIAV
IHRGKIVERGSHLELIKNLDGAYSQLIRLQEVNKESGEDVDGKSIYEIPVESFGRPISPG
QCKRISSQKSLSWESSTNDSSHHSFSIAEYTSTSKGPSREKVPAESEEKFPLVSIWRLAH
LNKPEIPIILLGVIAAIISGMLLPILGILLTRVIHSFYEKPADLIKDTAFWSKMFVILGV
VSFLAIPARAYFLSVAGCKLIERIRLMCFDKLVRMEVGWFDEQEHSSGFLGVKLSADAAA
TRSLVGDALGQILQVIASVVAGLIIAFITSWKLAFIVLSLIPLIGINEYLQVRSMKGFSA
DSKMIYEEASQVANDAVGSIRTVASFCAEDKVMHLYSRKCEGPRKAGIRQGLITGIGFGT
SFVMLFLVYATSFYAGARFIEAEKATFSDVFLVFFALTFAATGVSQTSSMGPDTSKAKDA
ATSIFAILDQQSKIDPLDESGMTLDYLKGDIEFCNLSFKYPCRSDVQIFRDLNLAIHSSK
TVALVGESGSGKSTFISLLQRFYDPDSGYVTLDGIEIQKFQVKWLRQQMGLVSQEPVLFN
DTIRANIAYGKEGNAIESEIKAVAELANAHSFISALPEGYDTIVGERGVQLSGGQKQRVA
IARAMIKSPKILLLDEATSALDAESERVVQDSLDRVMVNRTTVVVAHRLSTIKNANVIAV
VKDGVIVEEGEHETLIKMEDGFYASLVTLHTTSSIAS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgaatggcttggatgggaaaacaaatatacaggaggctgcagcactaaaa
agaagagtaaaggcaaagaaaatacccaacatgattggtgatgcagatgatcacttggag
aagaaaggaggaggaggagatcatcatcagaataccaaaagtgttccatttctcaagctg
ttctcatttgcagattcttcagacattttcttgatgattgttggcacgataggcgccatt
gggaatggtctaggcctacctcttagcacaatattatttggccaaatgattaatgctttg
caggtcgacaaagatgttgttcgtgtgacttccgagatatgccttaaaacactctacctt
gcagctgggattggtgctgcaggattcctccaggtggcttgctggatggtcacaggggcg
agacaagctgcacgaataagaggcgtgtatttgaagaccattttgagacaagatgtggct
ttctttgacaaagaaactaacaccggagaggttgttggcagaatgtccggtgacactgtt
ctcatacaagatgccatgggtgagaaggttgggaaatttctgcagttggtatcgactttc
atcgggggctttgttgtagcatttttaaaagggtggcttctaacccttttgttgttagcc
tcggttcctcttattgtgacttcaggtggtcttatgtacattgctatatccaagacggca
tctcgtggacaggatgcttatacgaatgcagcaaatgctgttgaacagacaatcagctca
attaggacagtggcatcgtttactggggaaaagcaagctgtaaataactacaaaaagttc
ctactaacgacttacaaatctggtgttcaagaaggctttgtatctggattaggttttggc
ctggttacgtttgtcatttattgttgctatgctatggccgtatggtttggagcaaagatg
gtactgtataaaggatacactgggggtgatgtgctgaatgtgatgatgtctctgttgact
ggatctgcgtccctaggccaagcgtctccctgcatgagtgcctttgttgccggtaaagtt
gcggcatataagatgtttgagactattgagaggaaaccaaagatagatgcttatgacaca
aaggggaaaattttggacgatgttcgtggagatatagagttgagagatgtttttttcagt
tatccaaccagaccagatctgcaaatattcagtggtttctgtctttccatccagagtggc
acaactgcagcattggttggacaaagtggaagtgggaagtcaacagttatcagtctaata
gagagattctacgacccacaagctggtaaagttcttatagatggaattaacctcaaagac
ctccaactcaattggattagggggaaaattggtcttgttagccaagaacctgtgttgttc
gcatgtagcataagggataatattgcatatggaaaggatggtgccacaaccgaagagata
agagttgctgctgaacttgcaaatgctgctaaattgatcgatgcactgcctcagggacta
gaaaccacagttggtgctcacggaacgcagctctctggtggtcaaaagcaaagaattgcc
attgcaagagcaattttgaaggaccctcgaattttgcttctagacgaagctacaagtgca
ctagatgtggaatctgagaggattgtgcaggaggcactggataggatcatggtcaaccaa
actactctcattgttgcccatcgtttaagcacagtgagaaatgctgacatgattgcagtc
attcacagaggaaagatagttgaaagaggctcacacttagagctaatcaagaatcttgat
ggagcttactctcagcttatacgcttgcaagaagttaacaaggaatcgggagaagatgta
gatggtaaaagcatatacgaaattcctgttgaatcgtttggacggccaattagtcctgga
cagtgtaaaagaatttcatcccaaaaatccctaagttgggaatcatctaccaatgatagt
agccaccattcattctcaattgcagaatatacttccacctcaaaaggcccgagccgtgag
aaagtgccagcagaatcagaagaaaaatttccattggtttcaatctggcgccttgcacac
ctcaacaagccagagattccaattattcttcttggggttatagctgctatcatcagtggc
atgttacttcctattcttggcatcctccttaccagggtaatacactcattctatgaaaaa
cctgcagatctgataaaggatacagcgttttggtcgaaaatgtttgtgatccttggtgtg
gtatcatttttggcaattccagcacgagcatacttcctttctgtggccggatgtaagttg
atagaacgtattcgattgatgtgttttgacaaattggttcgcatggaggttggttggttt
gatgagcaggagcactcaagtggtttcctgggagttaagctctcagcagatgctgcagca
actcgttcgcttgttggagatgcacttggtcagatacttcaggttattgcttcagtagtt
gcgggcttgatcattgcatttattacaagttggaagttggcatttattgtcctttccttg
atccccctgatcggaatcaatgaatatcttcaagtccggtccatgaaaggattcagtgca
gattcaaagatgatatatgaggaagcaagtcaagttgccaacgatgcagttgggagcata
agaacagtcgcttctttctgtgccgaagacaaggtgatgcatctatacagcaggaaatgt
gaaggcccaagaaaggcaggaataagacaaggcttgatcactggaataggatttgggaca
tcttttgtcatgctgtttcttgtctacgctaccagtttctatgcaggagctcgattcatt
gaggctgagaaagcaactttctcagatgttttcctcgttttctttgctttgacctttgca
gctacgggagtttctcaaacaagctccatgggtccagacaccagcaaggccaaggatgct
gctacttccatatttgcaatactagaccaacagtcaaagatagatccgttagatgagtct
ggcatgactttggattatctgaagggagacattgaattttgcaatttaagctttaaatat
ccatgcagatcagatgtccagatttttcgagacctcaacttggctattcattctagcaag
acagttgccttggttggagaaagtgggagtgggaaatctacgttcatctccttgttacaa
agattttatgatcctgattctggttatgttactcttgatggaattgaaattcagaagttt
caagtgaaatggttgaggcaacagatgggtcttgtgagtcaagaaccagttttgttcaat
gacaccatccgtgccaacattgcatacggaaaggaaggaaatgcaattgagtcagaaatt
aaagcagtagcagagttggcaaatgctcacagcttcatcagtgccttaccagagggttac
gacaccatagtaggagaacgtggagtccaattgtctggagggcaaaaacaacgcgtagcc
attgctcgtgctatgatcaaaagtccaaaaatattgctattagatgaggctacaagtgca
ctggatgctgaatccgaaagagtagttcaagattcattggacagagtcatggttaaccgg
actacagtcgtggtggctcatcgattatctacaatcaagaatgcaaatgtaatcgcagtt
gttaaagatggagttattgtggaggaaggagagcatgagactttgattaaaatggaggat
ggtttttacgcctccttggttacactccacacaactagtagtattgcctcgtag
DBGET
integrated database retrieval system
