Carya illinoinensis (pecan): 122316960
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Entry
122316960 CDS
T08745
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00730
Thiamine metabolism
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
122316960
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122316960
Enzymes [BR:
cill01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
122316960
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Motif
Other DBs
NCBI-GeneID:
122316960
NCBI-ProteinID:
XP_042989766
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All DBs
Position
7:42580448..42592001
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AA seq
715 aa
AA seq
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MGTASAGCPFGISSHSYKKTSALPHRMDCASSGFPLNVQVARINIYPSSGSSITSKGVVS
RLGSLPDIDDFFWEKVPTPILDVVENPIHLKNLSPKELKQLSDEIRLELSSIMSKAHKSF
KSSLSVVELTVAIHHVFNAPVDKILWDDGDQTYVHKILTGRRTLMHTVRKKNGLSGFTSR
FESDYDPFGAGHGCNSISAGLGMAIARDIKGKRERIVAVISNGTTMAGQVYEAMSNVGYL
DSNVVVILNDSRHSLHPKTEEGPKTSINALSSTLSRLQSSKSFRKFREAAKGVTKRIGSG
MHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVL
VHVITEENQGPENNQKIDISDLSNFGSLPSRIHSLTYSDCFVEALVFEAEKDKDIVTVHA
GMQIEPSLQLFQEKFPDKFFDMGIAEQHAVTFSAGLSCGGLKPFCIIPSTFLQRAYDQVI
HDVDRQRIPVRFIITSAGLVGSDGPLQCGAFDITLMSCLPNMIVMAPSDEDELVHMVATA
AQINDRPICFRYPRGAIVGVGYPICSGIPIEIGRGRVLAEGKDVALLGYGAMVQNCLRAR
SLLSKLGLEVTVADARFCKPLDIKLLRHLCENHAFLITVEEGSIGGFGSHVAQFLTLDGQ
LDGRIKWRPIVLPDNYIEHASADEQLALAGLTGHHIAATALSLLGRNREALLLMC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgcctctgctgggtgtccgtttggaatttcttctcattcctataaaaaaact
agcgctttgcctcacaggatggactgcgcaagctctggtttccctcttaatgtccaagtc
gcgagaattaatatctatcctagttccggttcctccattacttccaagggagttgtcagt
cgattggggtcattacctgatattgatgatttcttttgggagaaagtcccaacacccata
cttgatgtagttgaaaacccaatccacttgaagaatttgtctcctaaggaactgaaacaa
ttatcagatgaaattcgtttggaactatcttctataatgtcaaaagcgcacaaatcattt
aaatcgagtttgtcggtggtggagctgacagttgcaatacaccatgttttcaatgcacca
gttgataagatcctgtgggatgacggggaccaaacatacgtgcacaagattcttaccgga
aggcggaccctcatgcacacagtgcgaaaaaagaatgggctttctggttttacatctcga
tttgagagtgattacgatccttttggtgcgggccatggctgcaacagcatttctgctgga
cttggtatggcgattgctagggatattaaagggaaacgggagcgtatagttgctgtcatc
agcaatgggacaaccatggcaggtcaggtctatgaggcaatgagtaatgtgggctatctg
gactcaaatgtggtggtgattttaaatgacagccgtcactctctacacccaaagactgaa
gagggccccaagacatccattaatgctctatccagtactctaagtaggctccagtcaagt
aaatccttccggaagtttagagaagctgctaagggtgttactaaaaggattggtagtggt
atgcatgagttggcggccaaagttgatgagtatgcacgtggtatgatgggtccactggga
tcaactctttttgaagagcttggattgtattacataggccccgttgatgggcataatatt
gaagacctgatttgtgttctgcaagaagtagcatctctggattcaatgggtcctgtgttg
gttcatgtgataacagaggaaaatcagggaccagaaaataatcagaagattgatatttca
gatttaagtaattttggttcattaccatctaggatccactcattgacatacagtgattgc
tttgtggaggctttagttttcgaggcagagaaggataaagatatcgtgacagttcatgca
ggaatgcaaattgaaccatcacttcaattatttcaggaaaaatttcctgacaagtttttt
gacatgggaattgctgagcaacatgcagttacattttctgctggtttgtcttgtggtgga
ttgaagccattttgcataatcccatccacctttctgcaaagagcttatgatcaggtgatc
catgatgtagatcggcagagaattccagtgcgtttcatcattacaagtgcaggacttgta
gggtctgatggcccattgcagtgtggggcattcgatataacattaatgtcatgcttgcca
aacatgatagtaatggcaccatccgatgaggatgaacttgtccacatggtggccacagca
gcccaaattaatgatcgacctatttgcttcagatatcctaggggtgcaattgtaggggta
ggctaccctatatgcagtggaattcccattgagattggaagagggagagttcttgctgag
ggtaaagatgttgctttgcttggctatggagcaatggttcagaattgtctgagggctcgc
tcccttctctcaaagcttggccttgaggtaacagtggcagatgcaaggttctgtaagccc
ctagatatcaagcttctgaggcatctgtgtgaaaatcacgcatttctgatcaccgttgag
gagggctctattgggggatttggatcccatgttgcacagtttctcacacttgatggacaa
ctcgatggaagaattaagtggcgtccaattgttctaccagacaactacatagaacatgca
tcagcagatgaacagcttgctcttgctgggttgactggtcatcacatagctgcaacagca
ttaagtttgcttggccgcaatcgtgaagccctcctcttgatgtgctag
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