Carya illinoinensis (pecan): 122316983
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Entry
122316983 CDS
T08745
Name
(RefSeq) F-box/LRR-repeat protein 3 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122316983
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122316983
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_8
LRR_14
Motif
Other DBs
NCBI-GeneID:
122316983
NCBI-ProteinID:
XP_042989790
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Position
7:complement(3054434..3059456)
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AA seq
644 aa
AA seq
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MSPISLLSVLTEDLLVRVYTRLGSDSDRKTWRIVCKDFLRVDLVSRRSLRILRFEFLQCL
LFKYTNLDSLDLSVCPRIEDGAISLLLSRPEWLNWTRCLTRLTLSRATGLGHSGLELLFR
ACPRLEAVDVSYCWGYGDMEASAISCAKGLRELRMDKCLGVTDVGLARIAVGCGKLERLS
LKWCMEISDLGVDLLCKKCLDLKSLDVSYLKLTSESLRSIASLPKLEVLAMSGCPFVDDV
GLQFLENRCPLLQVIDVSRCEFLTSSSLQSVARGHNGLLQLNAGYCLLGLPATVLHCLKD
LKNLNTIRIDGARVSDSIFEIISSNCKSLVEIGLSKCVGVTDMGIMQLVSGCVDLKIVNL
TCCRSITDAAISALAKSCWKLVCLKLESCDKVTEKSLNQLGSCCLGLEEIDLTDCSGVDD
KGLKYLSGCSELLCLKLGLCTNISDKGLAYIAFNCTRISELDLYRCTGIGDDGLAALTNG
CKKLMKLNLSYCNGVTDRGMQYIGHLKELSDLEMRGLINITSVGLTAVAAGCKRLAELDL
KHCEKIDDSGFWALAYYSRNMRQINMSYCAVSDVGLCMVMGNLTRLQDAKLVHLSKVTVK
GFELALRACSVRIRKLKLNSRLRLVLSSETLETLHARGCMFSWD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatatcattgctttctgtgttaaccgaagacttacttgtccgggtttatacc
agactcggatctgattctgaccggaagacgtggagaatcgtctgtaaggacttcctccga
gtcgacttggttagtaggcgatccctccgaatcctcaggttcgagtttttacagtgcctt
ctcttcaagtacacgaacctagattccctcgacctttccgtctgcccacgcatcgaagat
ggggccatttcgctcctactgagccggcctgaatggctgaattggactcggtgcttgact
cggctcacgcttagtcgcgcaaccgggttgggacactctgggttggagctgctgtttcgg
gcgtgtccgcgtcttgaggcggtggacgtgtcatactgctggggttacggggacatggag
gcctcggcgatatcgtgtgccaaaggcctgagggagctgaggatggacaagtgcttgggg
gtcaccgatgttgggttggcaaggatagcggttgggtgtgggaagctggaaaggctgagc
ttgaagtggtgcatggagatatccgatctgggtgtggatcttttgtgcaagaaatgtctg
gacttgaagtctcttgatgtttcgtatctcaagcttacaagtgaatctctacgttcaatt
gcttctctgccgaaactggaggttttagctatgtcgggatgcccttttgtagatgatgtt
ggattacaatttctagaaaatagatgcccattgctacaggtgattgacgtatctagatgt
gaatttctgacttcctctagtttacaatctgtagcaagaggacataacggtcttctgcag
ctcaatgctggatactgtctcttggggcttccggcaacggttctccactgcttgaaggac
ttgaagaatctaaacacaataagaattgatggggctcgagtctctgactcaattttcgag
atcatcagctccaattgcaagtcgttggtggaaattgggttgagcaaatgtgttggggtg
accgacatgggcatcatgcagctagtatctggctgtgtggatttgaagattgtcaatcta
acatgttgccgttctatcactgatgcagcaatttcagctttagcaaaatcttgttggaag
cttgtgtgcctaaagttagagtcttgcgataaagtcaccgagaagagtctcaatcagctt
ggatcatgttgtttgggacttgaggagattgatctgactgattgctctggcgtagatgac
aaaggactcaaatatttgtctggatgctcagaacttttatgcttaaaattaggactgtgc
acaaacatatcagacaaaggattggcttatatcgcttttaactgtacaagaattagtgaa
ctcgatttataccgctgtacaggtataggagacgatggattagctgcgttaacaaatggt
tgcaagaaattgatgaagctgaacttgtcctactgcaatggagttaccgacagggggatg
cagtatattggccatcttaaggaactctctgacctagagatgcgtgggctcatcaacatc
acaagtgtgggtttgacagcagttgcagctgggtgtaagagactggcagaattggattta
aaacattgtgaaaagattgatgactctggtttctgggcacttgcctactactcacggaac
atgcggcagataaatatgagctattgtgctgtgtcagatgtggggctgtgcatggtgatg
ggtaatctaacacggctacaagatgccaagctagtgcatctctcgaaagtcacagtaaag
gggtttgagcttgcacttagggcctgctctgtccggatcagaaagctcaagttaaattct
cgcctcagacttgtactttcttcagagacacttgagacactgcatgcgaggggttgcatg
tttagttgggattaa
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