Carya illinoinensis (pecan): 122317013
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Entry
122317013 CDS
T08745
Name
(RefSeq) 26S proteasome regulatory subunit 4 homolog B-like
KO
K03062
26S proteasome regulatory subunit T2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122317013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cill03051
]
122317013
Proteasome [BR:
cill03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122317013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
DUF815
nSTAND3
AAA_5
AAA_2
AAA_16
RuvB_N
AAA_lid_PRS2_C
ATPase
TIP49
RNA_helicase
AAA_3
NPHP3_N
DUF1128
AAA_24
AAA_28
Sigma54_activat
TsaE
Mg_chelatase
NB-ARC
AAA_7
AAA_25
IstB_IS21
Parvo_NS1
NACHT
AAA_14
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122317013
NCBI-ProteinID:
XP_042989832
LinkDB
All DBs
Position
7:39527234..39531227
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AA seq
443 aa
AA seq
DB search
MGQTPSSGPNRPGDRKHDDGKKKEKKYEPAAPPSRVGRKQRKQKGPEAAARLPPVTPLSK
CRLRLLKLERIKDYLLMEEEFVANQERLKPQEEKNEEDRSKVDDLRGSPMSVGNLEELID
ENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVE
KAPLESYADIGGLDDQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAK
AVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDA
HSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPD
IKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHA
DFKKAKEKVMFKKKEGVPEGLYM
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagactccttccagcgggccgaatcgcccaggcgaccgcaaacacgacgacggc
aaaaaaaaggagaaaaagtacgagcccgcggcgcctccctcccgcgttggccgcaagcag
cgtaagcaaaagggtcccgaggcagcggcccggctcccccctgtgactcctctaagcaag
tgcaggctccgactcctgaagctcgagcgcatcaaggactatctcttgatggaggaggag
ttcgtggctaaccaggagaggctcaagccccaggaggagaagaacgaagaggaccgctcc
aaggtcgacgatctccgcggctcccccatgagtgtgggcaatctggaggagctgattgac
gagaatcatgccattgtgtcgtcctcggtggggcccgagtattacgttgggatcctttcg
tttgtggacaaggatcagctggagcccggatgcgccattcttatgcacaataaggtcctt
tctgtggttgggcttcttcaagatgaggttgatcccatggtgtccgtgatgaaagttgag
aaggctccactggagtcttatgctgacataggcgggttggatgaccagattcaggaaatt
aaagaagcggtggagcttcctcttactcatcctgaattatacgaagacattggcatcaag
ccccccaaaggagtcatactatatggggagcctgggactgggaaaactttgcttgccaag
gcagtggcaaactcaacctcagcaactttcttgcgtgttgtcggaagtgaattaattcag
aaatacttgggtgatggacctaaattagtcagggaactctttcgagttgcagatgagctt
tcaccatcaattgtcttcattgatgagattgatgcagtaggcacaaaaaggtacgatgca
cattcaggtggggaacgtgagattcagaggactatgttggaattgctgaatcagttagat
ggttttgactcaagaggagatgtcaaagtgattcttgctacaaatagaatagagagtctt
gatccagccttgctgcgtcctggtcgaattgaccggaagattgaattccctctaccagat
ataaaaacgaggaggcgtattttccagatacacacgtcgagaatgacattggcagatgat
gtcaacttagaagagtttgtgatgactaaagatgaattttctggggccgatataaaagca
atttgtactgaggctggcttgcttgctttaagagagcgtcgtatgaaggtaacacatgca
gacttcaagaaagccaaggagaaggtcatgtttaaaaagaaagaaggggtgccagaaggg
ctctatatgtaa
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