Carya illinoinensis (pecan): 122317079
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Entry
122317079 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122317079 isoform X1
KO
K24737
WD repeat-containing protein 6
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cill04990
]
122317079
Domain-containing proteins not elsewhere classified [BR:
cill04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
122317079
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
TRADD-like_N
GBR_NSP5
Motif
Other DBs
NCBI-GeneID:
122317079
NCBI-ProteinID:
XP_042989915
LinkDB
All DBs
Position
7:31943440..31956065
Genome browser
AA seq
1410 aa
AA seq
DB search
MAEPPTEWRLQSGQYLGEISALCFLHLPSHVSSLPYLLAGSGSQILLYSLDSGQLIRSFH
VFQGIRVHGIACNDSINCAEGTISSKLAFQLAVFGERRVKLFSLMIDFGLKPQNGSGICV
NLNQLHLLPKFNNWVLDVCFLKGLVRSLDEGSHCLAIGCSDNSVLVWDILSSSVVLQVQS
PERCLLYSLRLWGDNIEALQIASGTIFNEILVWKVVSQNDAPSLANPMEDHIDQRCPFYN
NVWFHCRQFEAVHICKLAGHEGSIFRIAWSSDGRKLVSVSDDLDLCSARVWTIHGARNGY
DKPGVSIGPDLDGFVLFGHNARVWDCCISDFLIVTVGEDCTCRMWGLDGKQLQMIKEHIG
RGIWRCLYDAKFSLLVTAGFDSAIKVHQLHGSLSGGLHGHAEVKEFIDGMEIFTVRIPNT
SEHCGLTDSKSEYVRCLHFTSEDTLYVATNRGYLYHTKVSNTRDVKWTELVCVSKEVPIV
CMDVLSNKSSELCGAVEDWVAVGDGRGYMTIARVFCDSYTPEVSLTFTWPAGIERQLLGT
YWCKSLGYRYIFTTDPKGMLKLWRLCGPSPQASHNSSRSYNNVSLVGEFASCFGNRVLCL
NASFEKEVLVCGDVRGNLVLFPLLKDLLLNTSVASKVKISPINYFKGVHGISSVSSVSFS
RLSSEQIEICSTGGDGCICNLEYDRDHRTLEFIGMKQVKELSLIQSVSADNDSLDNLASG
CYAAGFASVDFIIWNLITETKVVQIPCGGWRRPHSYYLGDVPEMQNCFAYVKDEMIYIHR
NWTLDGERRIIPQNLHVQFHGREMHTLCFVSELRANDLFSRSIWIATGCEDGTVRLTRYT
ADVANWSASKLLGEHVGGSAVRSICFASEVHIVASEDTNIPDGRSRQTAGAGSGENPFLL
ISVGAKRVLTSWLLRNRKHKEETVDQQYGETGNSCKPSSGESSSMSFQWLSTDMPARYSS
SDYYPEEMEKVVSATENVHGTKVGARSFFRGKGKMDITSGFGDKYEDDWRYLAVTAFLVK
CPDSRLTVCFVVVACSDATLVLRALILPCRLWFDVALLVPLSSPVLALQHVIIPICLPSE
DNSQKRSVFIVISGATDGSIAFWDLTGAVEAFMRRLSTLQVENFIDCQKRPRTGRGSQGG
RWWRSLSNSISKRKPGYRSSVTMKAGDVPNSNMLNQVTNGTEFLINDSGSSAATCSNAIN
TASLEPPANVDDSPSEICEIGPLHVLSNVHQSGVNCLRVSDIRDCQNSLSGLMFNIISGG
DDQALYYLRFKLSLIAMVPDNEFMAPDIRNSNGRPESTNTFVNCGERQVEDYEIKFLYHE
KIASAHSSAVKGVWTDGSWVFSTGLDQRVRCWLIEKDGKLTEHAYLVVSVPEPEALDARV
CGRNHYQIAVAGRGMQIFEFAGVCETDHGK
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcctccaactgaatggcgtttacagagcggtcaataccttggagaaatctca
gccctctgtttccttcacctcccgtcccatgtttcttctctcccgtacctcctggccggt
tcaggctcacaaatcctgctgtacagtttagattctggacaactaataaggtcctttcat
gtcttccaagggattcgtgtacacggtattgcttgtaatgattccattaattgcgccgag
ggaaccatttcctctaagcttgcttttcaactcgctgtatttggtgaaaggcgtgtgaaa
ttgtttagcttgatgattgattttggtttgaaaccccaaaatggatccgggatttgtgtg
aatttgaaccagttgcatttgttgcccaagtttaataattgggttttggatgtctgcttt
ttgaagggacttgtacgttctctcgatgaggggagccattgtcttgcaattgggtgtagt
gacaactctgttcttgtttgggatattttgagttctagtgtggttcttcaagtccagtct
ccagagaggtgccttctttattccctgcggctatggggtgacaatattgaagctcttcaa
attgcatctggtactatttttaatgagattcttgtttggaaagtggtttctcagaatgat
gctccatctttggcaaatcctatggaagaccatattgatcagaggtgcccattctacaac
aatgtctggtttcattgtcggcagtttgaagctgttcatatatgcaaacttgctggccat
gaaggctcaatctttcgcatagcatggtcctctgatggacgcaaattggtatctgtttct
gatgatcttgatctgtgcagtgctcgtgtctggacaattcatggtgcaaggaatggttat
gataagcccggagtttctattggccctgaccttgatggatttgtgctgtttggtcataat
gccagagtttgggactgctgtattagtgattttttgattgtcaccgtgggtgaggattgt
acatgtcgcatgtggggattagatggtaagcagcttcagatgatcaaggagcacatagga
aggggcatttggcgatgtttgtatgatgcaaagttttcgcttcttgtaactgctgggttt
gattctgcaattaaagtgcatcaactgcatggctctttgtctgggggtttgcatgggcat
gctgaggtaaaagagtttattgacggaatggagatattcactgttcgtatccctaataca
tcagagcattgtggactcactgacagcaaaagtgaatatgttcgctgtttacatttcaca
agtgaagataccctttatgttgccacaaaccgtggttatttgtaccacactaaagtatca
aataccagggatgtaaaatggactgaacttgtctgtgtcagtaaagaggttccaattgta
tgcatggatgtcctatccaataaatcatctgagctttgtggtgctgttgaggattgggtt
gctgtgggtgatggtcgaggatacatgaccattgccagagtattttgtgatagttatact
cctgaagtgagcctcacatttacttggccagctggaatagagagacagctcttaggaacc
tattggtgcaagtcattaggatataggtacatttttaccactgatcctaaaggaatgttg
aaactgtggagattgtgtggcccttcaccacaagcttctcacaattcttcaaggagttac
aataatgtgtctctggtaggggagtttgcatcatgctttggaaacagagtattgtgtttg
aatgcatcttttgagaaagaggttctggtgtgtggggacgtacgtggtaatttggtcctc
tttccattgttgaaggacctgttgttgaatacatccgttgcatccaaagtgaaaatctct
ccaataaattattttaaaggagttcatgggatatcaagtgtgtccagtgtttcattcagc
agattaagttctgagcagattgaaatatgttcgactggaggagatggatgcatttgcaat
ttggaatatgacagggatcatagaactttagaatttatagggatgaaacaagttaaagaa
ttgagtttgatccaatctgtatctgccgataatgattcacttgacaatttagctagtggt
tgctatgcagctggttttgcgtcagtagattttataatatggaatctaataactgagaca
aaggttgtgcaaataccatgtggtggatggcggcgtcctcattcttattatcttggtgat
gtaccagagatgcagaactgctttgcatatgtcaaggatgagatgatctatattcataga
aattggacactggatggtgagaggaggataatcccccagaatttgcatgtgcaattccat
gggagagagatgcataccttatgctttgtctctgaacttcgagctaacgatctcttttct
agatctatttggattgcaactggctgtgaagatggaactgttaggttgactaggtataca
gcagatgtggcgaattggtctgcatcaaaattgcttggggagcatgttggtggatcagct
gtaaggtcaatatgctttgcgtcggaggtacatatagttgcatcagaggacaccaacatt
cctgatgggaggagcaggcaaactgctggtgcaggtagtggagagaatccatttttactg
atttcagttggtgcaaagcgggtcttgacttcttggctactaagaaataggaagcacaag
gaagaaacagttgatcagcagtatggtgaaactggaaatagctgtaagccttcatcagga
gagtcttcatcaatgtcattccagtggctttctactgacatgccagcaaggtattcaagt
tctgattattatccagaagagatggagaaagtagtcagtgcaacagaaaatgtccacggt
acaaaagttggtgcaagatcattttttcgaggaaagggaaagatggacataacatctggc
tttggagataagtatgaagacgattggagatacctggctgtcacagcttttcttgttaaa
tgtcctgattccaggttaactgtctgttttgttgttgttgcttgttcagatgccacactt
gtactacgggctttaattttgccctgtcgtttatggtttgatgttgctttgttggttcct
ctatcatcaccagttttggctttgcagcatgtcatcattccaatatgtcttccttctgaa
gataacagtcagaaacgaagtgtatttattgttattagtggagctactgatggcagtatt
gccttctgggatctgactggagccgttgaagcttttatgcggcggctttcaactcttcag
gtagaaaacttcattgactgtcagaaacggccacgcactggtaggggaagtcagggagga
cgatggtggagatcattaagcaatagcatatctaagagaaaaccaggttaccgtagttca
gtgaccatgaaagctggagatgtaccaaattcaaatatgctaaaccaggttacaaatgga
acagaatttttgataaatgattctggaagtagtgcagcaacttgttcaaatgctataaat
actgcttccctggagcctccagcaaatgtagatgactcaccatctgagatatgtgaaata
gggcctttacatgttctaagtaatgttcaccaatctggagtcaattgtcttcgtgtttca
gatataagagattgtcaaaactccctgtctggtttaatgttcaatataataagtgggggc
gatgatcaagcgctttactatcttagatttaaattgtctctgatagcaatggtcccggat
aatgagtttatggcaccagacatcagaaattcaaatgggagacctgaaagtaccaatacc
tttgttaattgtggagaaagacaggtcgaggattatgagatcaaattcttatatcatgag
aaaattgcatcagctcacagctctgctgtaaaaggtgtttggacggatggctcttgggtg
ttctctactggtcttgatcagcgtgtcaggtgctggcttattgaaaaagatggcaaacta
actgagcatgcttatttagtggttagtgtgccagagcccgaagcattggatgctagagta
tgtggcagaaaccattatcagattgctgtagctggaagaggaatgcaaatctttgagttt
gctggagtctgtgaaacagaccatggaaaatga
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