Carya illinoinensis (pecan): 122317108
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Entry
122317108 CDS
T08745
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122317108
Membrane trafficking [BR:
cill04131
]
Autophagy
Other autophagy associated proteins
Others
122317108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EML
BCAS3_WD40
KNTC1_N
Beta-prop_IFT140_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT80_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Ge1_WD40
WDR93
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
122317108
NCBI-ProteinID:
XP_042989963
LinkDB
All DBs
Position
7:28998792..29000691
Genome browser
AA seq
358 aa
AA seq
DB search
MPTSSASCESSPSPWPLYIVNSSPRFSDSNSSMHRQPLEPCHPDPNPNLDIQKPFSISRS
SDPQTLVHLSFFMDHRFFAAGTSHGFRVFSCDPFRELFSREFKDGGFAAVQMHLRSSILA
LVGGGPHSKFPLHKVIFWDERQSYWASEISFRSEVRSIRLRYDRIVVVLEHKIYVYTFNH
LRLVHQLETIANPEGLCAVSQLDGSLVLACIGLRNGQVRVEHYAAKRTKFIMAHDSKIAC
LELSQDGLFLATASSKGTLVRIFSTLDATLLQEVRRGTDQADIYSLAFSSTAQWLAVTSD
KGTVHVFNLKVNPGLEGGDEPQNASDADVAVTKLSSPLSFIQGKNFLPSLIYLCCWYI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcctactagctctgcctcctgtgagtcctctccctctccctggcccctttacatagtt
aattcttctccgcgcttctccgactccaattcctccatgcatcgccagccattggaaccc
tgccaccccgaccctaaccctaaccttgacatccagaagccgttttctatttcgcggtcg
tctgatccgcagacgctggttcacctgtcgttcttcatggaccataggttcttcgcggct
ggtacgagccacgggttcagagtcttcagctgcgaccctttccgcgagctcttcagccgt
gaattcaaggacggcggcttcgccgctgtccagatgcacttacgaagcagcatcctggcc
cttgtaggcggtgggccccactccaagtttcctctccacaaggtcattttctgggacgag
cgacagtcctactgggcctctgagatctctttccgctccgaagtccgctccatccgcctc
cgctatgaccgtatcgtcgtcgttttggagcataagatctacgtgtatactttcaatcac
ttaaggttggtccaccaattggagaccatcgcaaaccctgagggcctctgcgcggtctca
cagttggacgggtcgttagtccttgcctgcatcgggttgcgcaatggccaggttagggtc
gagcactacgcggccaagaggaccaagttcatcatggcgcatgactccaaaatcgcgtgc
ttggagctcagccaggatgggctgtttctcgcgacggcgagcagtaaggggactcttgtc
cggattttcagtaccctcgatgcaacactacttcaagaggtaaggagaggcacagatcaa
gcagatatctacagtttggcattttcttcaactgcccagtggttagcagtcacaagtgac
aagggaactgtgcatgttttcaatcttaaagtcaatccaggattggaaggaggtgacgaa
ccacaaaatgcatctgatgcggatgttgctgttacaaaattaagctcacctctctctttc
attcaaggcaaaaactttcttccctccttgatatacttgtgctgttggtatatttaa
DBGET
integrated database retrieval system
