Carya illinoinensis (pecan): 122317169
Help
Entry
122317169 CDS
T08745
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122317169
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122317169
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
122317169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
Rtf2
4HB_MCP_1
vATP-synt_E
RING_XB3-XBAT31
MauJ
Motif
Other DBs
NCBI-GeneID:
122317169
NCBI-ProteinID:
XP_042990053
LinkDB
All DBs
Position
7:5520088..5524299
Genome browser
AA seq
381 aa
AA seq
DB search
MELNSIKDAFDRVAKKQKLSCSKSQEVIDQIIQEIERALGKIQPSPSDYKHVLSDLQTTL
KDIAPLSQLEGTQKELNIALSKYAKVIEKSFNPDIAKAYRNIEFDVHTVNQIIAVHFYRQ
GFFDIGDCFISEARELESVASMKSSFLEMYQILEAMKHWNLEPALNWAANNSDKLKQNGS
DLVLRLHSMQFLEILKKGSRNEALKYVRNHLTPLSSDHMAELQKLMACLLFTGRLDSSPY
SALISPTNWEKLAEELSKQFCNILGYSFESPLSVTIAAGIQGLPPLLKFMNVMAGKKQEW
QTMKQLPVPVELDKEFQFHSVFVCPVSKEQSTDDNPPMLMPCGHVLCKQSIMKMSKNSSK
SFKCPYCPSDVEATKCRQLYL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaatagtattaaagatgcttttgaccgtgttgcaaagaaacaaaagctgtcc
tgttctaaaagtcaagaagtgattgaccagattatccaagaaattgagagggcattaggg
aaaatacagccgtccccttctgattataaacatgtcctttctgatcttcaaaccacacta
aaagatattgctccactcagtcagctggagggtacccaaaaggagctgaacatagcacta
agcaagtatgcaaaggttattgagaaatcttttaatccagacatagctaaggcttatcga
aacattgaattcgatgtgcacacggtgaaccagataattgccgtccatttctatcgacaa
ggtttttttgacattggtgactgcttcataagcgaggccagggaactagaatctgttgct
tctatgaaatcctcatttttggaaatgtatcagatacttgaagctatgaagcattggaac
ctagagccagcgctgaactgggcagcaaacaactctgataaacttaaacaaaatggatca
gaccttgttctgagacttcacagcatgcagtttctggaaatactgaagaagggaagtaga
aatgaagctctgaagtatgtcagaaatcacctcactcccctttcttccgaccacatggct
gaattacagaagctcatggcctgtcttctcttcactggaagacttgatagctccccatac
tctgcattaatatcaccaactaattgggagaaattagctgaggagctaagcaaacagttc
tgcaatattcttgggtactcttttgagagcccgttgagtgtgactatagcagcagggatc
caggggttgccacctcttttgaagtttatgaatgtgatggcagggaagaagcaggaatgg
cagaccatgaagcagttgcctgtgccagtggagttggacaaggaatttcagttccattcc
gtctttgtatgtccagtgtccaaggagcaatcgaccgacgataacccaccaatgttgatg
ccatgtggccatgtgctgtgcaagcaatcaattatgaagatgtcgaagaacagctcaaaa
tctttcaagtgcccttactgtccatccgatgttgaagcaacaaaatgtaggcaactttat
ttgtga
DBGET
integrated database retrieval system
