Carya illinoinensis (pecan): 122317357
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Entry
122317357 CDS
T08745
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122317357
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122317357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
122317357
NCBI-ProteinID:
XP_042990340
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All DBs
Position
1:37678461..37685410
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AA seq
701 aa
AA seq
DB search
MEMYNVSEHGNTETYLIQGAESNPHLTSPLLEQIGAMYNEGAPEFVVDQGLYYPAATNYG
YYCTGFESPGEWEDQQRIFGVDGPDIQYTGAQNESSPYVYYTPGYGYAQSPYNPYNPYIP
GAMIGVESQFAGAQQYYTIPPYQNPVSPPAYVPFFVQQDIVPSTSAEPLYDNGASMNRPE
GRGLKQNFSSATGALPRNSIKSVPNQTSSLARVSEGPRAHVGPSKQSTIHGSAAGSFPSL
VSTNVLQSRNASGSVPAVDNISNGKVLSHQSQLKVTLPIGNGLSGFGSSAYGQAGGAKIR
PKFHVGRAMNEAIGSSDALGEQNRGPRINRSKNQLAVKAYTNRMGEDVQGNIIISTDQYN
KDEFPIDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNKKLDTAFEDAQRIGVGKTRS
CPIFLFFSVNASGQFCGVAEMVGPVDFNKDMDFWQQDKWSGSFPVKWHIIKDVPNTNFRH
IILENNENKPVTNSRDTQEIMHKKGQEMMKIFKSFTLKTSLLDDFMYYETRQKIMQEEKA
RLLVKSFDGPYFVPALDPPRKLNSVLELPPSEDENITKPNDGPNSSIKIGVFAPKQVSYN
SDVTNTSIEHGNAEQIAVEAKNDVVSTLKIGSVTISPKQAEPKPLLAVGIANNDVVTVGS
VPIKVNGFAESGFLTVGTIPLDPRALQLDKGSGSVNNGSQR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtataatgtttctgaacatggaaacacagagacttatctgattcaaggtgct
gaatcaaacccacacctgacaagtccattacttgaacaaattggagccatgtacaacgaa
ggagcccctgaatttgttgttgatcagggcttgtattatcctgctgccaccaactatgga
tattattgtacaggatttgaatcacctggcgaatgggaggaccaacaaaggatttttggt
gtagatggtccggatattcagtacacaggtgcacaaaatgaaagttcgccttatgtatat
tatacgcctggctatggatatgcacagtcgccatacaacccatacaatccttacatacct
ggtgctatgataggtgttgaaagtcaatttgcaggggcacagcagtattacactatcccc
ccttatcagaaccctgtctctcctcctgcttatgttcccttcttcgttcaacaagatatt
gtccctagtacttcagccgaacccttgtatgataacggtgcatcaatgaataggcctgaa
ggaagaggtttgaaacagaacttcagttcagctactggagccttgcctaggaattccata
aaatctgttccgaatcagacaagttccctggccagggtatcagaaggcccgagagcccat
gtcggacctagcaaacaatctacaatacatgggagtgctgctggtagttttccctctctg
gtttcaacaaatgttcttcagagtagaaatgcctctggctcagttccagctgtggataac
atttccaatggaaaggttctatctcatcaaagccaattgaaagtaactctccctatcggt
aatggtttatctggctttggatcaagtgcttacggacaggctggaggggccaagatacgg
cccaagtttcatgttggcagagcaatgaatgaggcaattggaagctcggatgcattgggt
gagcagaatcggggccctagaattaacagatcaaaaaatcaactggctgtcaaagcctac
acaaacaggatgggagaggatgtgcagggaaatattattatctctactgatcagtataac
aaggatgaatttcccattgattacgtggatgcaaagttttttgtaataaaatcatacagt
gaggatgatgtgcacaagagtattaagtataatgtttggtcatctacaccccatggaaac
aagaagttggatactgcttttgaagatgcacagagaataggtgtaggaaagactagaagc
tgtcctatcttcctcttcttctctgttaatgcaagtggtcaattctgtggtgttgcagag
atggttggcccagtcgacttcaataaggatatggatttttggcagcaagataaatggagt
gggagcttccctgtgaagtggcacatcatcaaagatgtcccgaacaccaattttagacac
ataattttagaaaataacgagaacaaaccagtgactaatagcagagacacacaagagata
atgcataagaaaggtcaggagatgatgaagattttcaaaagtttcacgttaaagacgtcc
ttacttgatgacttcatgtactatgaaactcgtcagaaaatcatgcaggaagagaaagcc
aggttacttgttaaaagctttgatggtccttattttgtacctgcattggatccccctcgc
aagctaaatagtgttcttgagctacctccaagtgaagatgaaaatattaccaagcccaat
gatggtccaaatagctcaataaagattggtgtctttgctcccaagcaggtttcttataat
tctgatgttaccaacacaagtatcgaacatggaaatgcagagcaaattgcagtcgaggca
aaaaatgatgttgtatctactttaaagattggttcggttaccataagccccaagcaagct
gagcctaagcccttactggctgtcgggatcgctaataatgatgttgtaactgtaggctca
gtgcctatcaaagttaatggatttgctgaatctggttttctaacagttgggaccattccg
cttgatcccagggcactgcagcttgacaaggggagtggttctgtcaacaatggatcccaa
cgttaa
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