Carya illinoinensis (pecan): 122317358
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Entry
122317358 CDS
T08745
Name
(RefSeq) F-box/LRR-repeat protein 4-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122317358
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122317358
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box_5
LRR_At1g61320_AtMIF1
LRR_RPS2
F-box
Motif
Other DBs
NCBI-GeneID:
122317358
NCBI-ProteinID:
XP_042990337
LinkDB
All DBs
Position
7:41028190..41030903
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AA seq
413 aa
AA seq
DB search
MLQATASEPHTLSLSVSVCVLARLTFSNKTHFSNRRHVYAPVKECFLTQFWVMSTLGDDE
LGLILNWVDDLYARKSLSVVCKQWLRVEGLTRLSVRVLDLDSFRGFLPRFPNLVTFECSR
RITDDGLRFLAQTCPKIEALNLNLKPPRENSDEFDQPCDDVGDDGLCALAIGCRKLSKVL
LRRRTNIGDVGVVSLINLASTLTNLDLGWCNLITDQALAAIGEASSLTILNLEGCSLITD
GGVTSLATMALSRSLKKLVLAECDQISDYGVSLLQQMYCLEELNMAECGPKITDIGGVAI
ATIQTLRRLNISWLINVSDPTLFALAENCQKLVAVDFTGCELITGAGIRAFSNHTCLETL
VFPSCYNIGVHDLENVVRGCRSLRCVVLDKRLKTWVTPMMQEYISIFCGLYWR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgttacaggcaaccgcttcagaaccccacacactctctctctctgtctctgtgtgtgtg
ttagctcgattaaccttctctaataagacgcacttctctaataggaggcatgtatacgct
ccggtcaaggaatgctttttgacacaattttgggttatgtcaacactgggtgacgatgaa
ttaggcctgatactcaactgggtcgacgacctatatgccagaaaatctctctctgtggtc
tgcaagcaatggctgagggtggagggtcttacccggttatccgtaagggttctagacctc
gattcctttcgtggtttcttaccaagattcccaaatttagttaccttcgaatgttcacgg
cggatcaccgatgacggccttagattcttggcccaaacatgtcccaaaatcgaggccctc
aaccttaatttgaaaccccctcgtgaaaattctgatgagtttgatcaaccctgcgatgat
gttggcgacgatggtctatgtgctttagcaatcggatgtcgcaagttgtcgaaagttttg
ctgcgaaggaggacgaatattggggatgttggagttgtttcgctgattaacttggcatca
actttgacgaacttggatttgggttggtgcaatttgattacggatcaagctcttgcagcg
attggggaggcaagttctctcactattttgaatttggaagggtgttctttaattacagat
ggtggggtaacttctttggcaacaatggctttgtcgaggtctttgaaaaagttggtcctg
gcagaatgtgatcaaattagcgattatggggtgtcccttttgcagcaaatgtattgcttg
gaggagctaaatatggccgaatgcgggccaaaaatcactgatattggaggcgtggcaatt
gctacaattcaaaccctcaggagactaaatatttcttggttaattaatgtatcagatcca
acacttttcgcacttgctgagaactgccagaaactggttgcggttgattttacgggctgc
gagttaataactggagctggaattcgtgccttctcaaatcatacctgtttagaaactcta
gtgtttccttcatgttacaacatcggtgttcatgatttggaaaatgtggtgcgtggatgt
cgctcattgaggtgtgttgtgctggataaaagactgaaaacgtgggtaacaccaatgatg
caagagtacattagcatattctgtggtctatattggaggtga
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