KEGG   Carya illinoinensis (pecan): 122317397
Entry
122317397         CDS       T08745                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5B
  KO
K14963  COMPASS component SWD3
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122317397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cill03036]
    122317397
Chromosome and associated proteins [BR:cill03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     122317397
    NSL complex
     122317397
   HMT complexes
    COMPASS/SET1 complex
     122317397
    COMPASS/SET1 complex (yeast)
     122317397
    MLL-HCF complex
     122317397
    MLL3/MLL4 complex
     122317397
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122317397
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 CFAP251_N DSE1_N Beta-prop_RIG_2nd Beta-prop_WDR41 PAC11 Beta-prop_EIPR1 ASA1 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_NWD2_C Beta-prop_WDR75_2nd WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_VPS8 eIF2A Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NOL10_N TRM82_WD WD40_like PROPPIN Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st Ge1_WD40 SHKBP1_KCTD3_C KNTC1_N Beta-prop_LRRK2 Tricorn_2nd WDR54 WD_LRWD1 Utp8_b_propeller
Other DBs
NCBI-GeneID: 122317397
NCBI-ProteinID: XP_042990406
LinkDB
Position
7:complement(25529328..25535790)
AA seq 313 aa
MASGTPYKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTVIVWSSQTLSLVHRLVG
HSDGISDLAWSSDSHYICSASDDRTLRIWDARAAATESAHVKTLRGHSDFVFCVNFSPQS
NLIVSGSFDETIRIWEVKTGRCLHAIRAHSMPVTSVHFNRDGSLIVSASHDGTCKIWDSS
TATLLKTLIDDKVPAVSFAKFSPNGKFILVATLNDTLKLWNYSTGKFLKIYTGHVNRVYC
ITSTFSVTNGKYIVSGSEDRCVYLWDLQQKTLVQKLEGHSDTVISVTCHPTENKIASAGL
DGDRTVRIWAQDS
NT seq 942 nt   +upstreamnt  +downstreamnt
atggccagcggtacaccctacaaaccctaccgccacctcaaaaccctgaccgcccacaca
cgtgccgtctcgtgcgttaagttctccaacgatggcaccctcttggcctcggcctccctt
gacaaaacggtgatcgtgtggtcctcccaaactctctccctcgtccaccgccttgtcggt
cactccgacgggatctccgacctcgcctggtcctccgactcccactacatctgctccgct
tccgatgaccgcaccctccgaatctgggacgcacgcgccgccgctaccgagtcggcgcac
gtgaagaccctgcggggccactccgattttgtattctgtgtcaacttcagcccgcagtcg
aacctcatcgtgtccgggtcattcgacgagacgattcgcatatgggaggtcaagaccggc
agatgcctccacgcaatccgggcccactccatgcctgtaacgtctgtacacttcaaccgg
gacggttcgctcatcgtctccgctagccacgacggcacctgcaagatctgggactcctcc
acggccacgctcctcaagacgctcatcgacgacaaggtccccgccgtgtcgttcgccaag
ttctcacccaacggcaagttcatcctcgtcgccacgctcaatgacacccttaagttgtgg
aactactcaactggaaagtttttgaagatttacacggggcatgtgaatagagtttactgt
ataacatccacattttctgtcacaaatgggaaatacattgtaagtgggtcagaggatcgc
tgtgtatatttgtgggatctccagcagaaaactttggttcagaaacttgaaggtcactct
gataccgttatttctgttacttgtcacccgactgagaacaaaattgcttctgctggcctt
gatggtgatagaactgtgaggatttgggctcaagactcatga

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