Carya illinoinensis (pecan): 122317431
Help
Entry
122317431 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122317431
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122317431
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122317431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Baculo_RING
zf-Nse
Prok-RING_1
RINGv
Arc
zinc_ribbon_16
DNA_ligase_ZBD
Rtf2
Prok-RING_4
zf_RING_Vps8
PHD
Zn_ribbon_IFT122_C
SLX1_C
PHD_NSD
DUF1272
zf-RING-like
zf-RING_4
Tmpp129
Motif
Other DBs
NCBI-GeneID:
122317431
NCBI-ProteinID:
XP_042990460
LinkDB
All DBs
Position
7:1945132..1946653
Genome browser
AA seq
358 aa
AA seq
DB search
MNFKNGIVSLFLLALLLQEIPWAAAQTVDDQDQYRYARFSPSMAIIVVVLVAALFLMGFF
SIYIRHCTNGETANSVRARVLSGRGAAATRGLDPAVIETFPTLVYSAVKGLKIGKGALEC
AVCLNEFEDNEKLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLVPQPGESVHQLGELD
AYSDLEAVNDAVGESSSRETAEREQGVEEAVVIDVKQTLNRNRTRGSRSSRNWRFPFPRS
HSTGHSLVQPGEDTERFTLRLPVEVRKQIMNRKLSRATSMVLLPREGSSRQGYRTGWEGS
SRGKNSRRLEKPQVSKSGRWAFFTRALSLKSPKVAANYGEGTSAQPETPKNNSARPPV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaaaaatggaatcgtttctctttttttgcttgctctcctcttgcaggagatt
ccttgggcggctgctcagactgtcgacgaccaggatcagtaccgttacgcgaggttcagc
ccctccatggcgataattgtcgtcgttcttgtcgccgctctcttcctcatgggttttttc
tccatctacatccgccactgcaccaacggagagaccgccaacagcgtccgtgcgcgagtt
ctctccggacgcggcgccgccgcaacacgtggtctcgatccggcggtgatcgagacgttc
ccgacacttgtttactctgcggtcaaggggctcaagattgggaagggcgccctggagtgc
gccgtgtgcttgaacgagttcgaggacaacgaaaagctgcgtttgatccccaagtgcgac
cacgtcttccaccccgagtgcatcgatgcctggttggcttcccacaccacctgtcccgtc
tgccgagccaacctcgttcctcaacccggcgagtccgtccaccaactgggcgagttggac
gcctactcggacctcgaagccgtaaacgacgccgtcggggaatcatccagcagagaaacg
gcggaacgggaacaaggagtagaagaagcggtagtgatcgatgtgaagcaaacgttgaac
cggaatcggacgcgagggtcaaggtcgagccggaattggaggtttccatttccgcggtcc
cactcaacggggcactcgttggtccaaccgggtgaggacacggaacggttcacgttgagg
ttaccggttgaggtgaggaaacagataatgaatcgtaagctaagccgggccactagtatg
gttttgttaccgagggaagggagttcgaggcagggttacagaaccggttgggaagggagt
agtagagggaagaattctaggcggctcgagaaacctcaggtgagtaaatcgggccggtgg
gcgttttttacgagagcattgtcattgaagtcaccaaaggtggcggctaattacggggag
gggacttcggctcaaccggaaacaccgaagaataactcggctcgacctccggtttga
DBGET
integrated database retrieval system
