Carya illinoinensis (pecan): 122317491
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Entry
122317491 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122317491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122317491
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122317491
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
HECT type E3
122317491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
122317491
NCBI-ProteinID:
XP_042990548
LinkDB
All DBs
Position
1:complement(37910986..37934075)
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AA seq
1050 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLFLRQQNSAALKIQKCFRGRK
AVKAEHFKAREHFYETYGKHYQNVNRHCFGPDSEFLRQLLFFFNAQNAGDFAILVETCRL
LLQFVRDSGYSISQKPLLPRTLVGGNIEGLFAGKDYSSNRTLVDFRVKQLAYACIQAVHQ
NRNWLEEQVLMAPEESSTSTSVLLETVVLLINPKLPWACNIVGYLLQRNTFTLFREIALT
WKESTKSGNAIGTVLSLGHVLGLIIPHVGQKPCTCPNIYSQSSFSSQILTIPFLWQLFPY
LKEVFASRGLSQHYLHQMAFCMQNSANILPNDVSAEYPSYACLLGNILETAGVALSQPNC
SFEMAVDLASVTTFLLETLPSMKSSGRESKESSMLVEDDTVAGDEAIEIGLSKDLEQQIC
NAIDPRFLLQLTNLLFGGISLAGGSHDGPDDKEVAAVGAACAFLHVTFNTLPLERIMTVL
AYRTELVPVLWNFMKRCHENQKWSSLSQQFAYLSGDAPGWLLPLAVFCPVYKHMLMIVDN
EEFYEQEKPLSLKDIRCLIIILRQALWQLLWINPATPANSVKFATNTSTNKRHPEEFIQE
RVSIVASELLSQLQDWNNRRQFTSPSDFHADGVNEFFISQALIENTRANDILKQAPFLVP
FTSRVKIFTSQLTAVRQRQESHSVFTRNRFRIRRDHILEDAYNQMSALSEEDLRGVIRVT
FVNEFGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQ
FFHFLGTLLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEG
DISDLELYFVIVNNEYGEQTEEELLPGGKNLRVSNENVITFIHLVANHRLNFQIRQQSSH
FLRGFQLLIQKDWIDMFNEHELQLLISGSVDSLDFDDLRLNTNYVGGYHKEHYVVEMFWE
VLKSFSLENQKKFLKFVTGCSRGPLLGFRYLEPLFCIQRAAGSASEEALDRLPTSATCMN
LLKLPPYRSKEQLETKLLYAINADAGFDLS
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctcgggcgatccatcgactcggaagcgagttgatttggggggccggagttcg
aaggaaagggataggcagaagcttctggagcagacgaggttggagcgcaatcggcgcttg
tttttacgccagcaaaactcagccgcgctcaaaatccagaaatgcttcagagggagaaag
gcagtgaaagctgaacattttaaggcgcgagagcatttctatgaaacctatgggaagcac
taccaaaatgtaaacaggcattgttttggcccagactcagagttcctccgtcagttactt
tttttctttaatgcacaaaatgctggcgattttgcaatccttgtggagacatgccgatta
cttctgcaatttgttcgtgatagtgggtacagtatctcacagaaacctttgctgcctaga
actttagttggtgggaacatcgaaggcctctttgctggcaaggattattcatccaaccga
accttggtggactttagagtgaagcaacttgcatatgcttgtattcaggctgtgcatcag
aatagaaattggttagaggagcaagtattgatggcgcctgaggaatctagcacatcaacg
agtgtcttgctagaaacagtagttttattgataaatccaaaacttccatgggcttgtaat
atagttggctatctattgcaaagaaatacattcaccctatttagagagattgcacttaca
tggaaggaaagtactaagagtggtaatgccattggtacagttttgtcattggggcatgtg
cttggccttataattcctcacgttggtcagaagccatgtacttgtccaaatatctactca
caatcgagtttctcatcccagattcttacaattccattcttgtggcagcttttcccatac
ttaaaagaggtttttgcaagtcgggggcttagccaacattacttacatcagatggcattt
tgtatgcaaaatagtgctaatatacttcctaatgatgtatccgctgaatatcctagttat
gcctgccttcttgggaatattttagaaactgctggtgttgctttatcacagcccaactgc
tcatttgaaatggctgtggatcttgcttctgttacaacgtttttgttggagacacttcct
tccatgaaatcatctggcagagagagtaaagaaagttccatgctggttgaggatgacaca
gttgcaggtgatgaagcaatagaaataggtttgagtaaggatttggaacaacaaatatgc
aatgctatagatcctcgatttcttctgcaattgacaaatttgttatttggaggaatttct
cttgctggtggttcacacgatggaccggatgataaggaggtggcagctgttggtgcagct
tgtgcttttctgcatgtcactttcaacactttacctcttgagcgaatcatgactgtacta
gcttacagaactgaacttgttcctgtactttggaattttatgaagcggtgccatgagaat
cagaaatggtcatccttgtcacagcagtttgcatatctgtctggagatgcacctggttgg
ctattgcccctggctgttttctgtcctgtgtacaagcacatgcttatgatagttgataat
gaggagttctatgagcaggagaaaccactatcattgaaggatattagatgccttataatt
attctaagacaggcgctatggcagcttctatggatcaatcctgcaacaccagctaattct
gtgaaattcgccaccaacacctctactaataagaggcatcctgaggaattcatccaagaa
agggttagcattgtagcctctgagctcctttcacagttgcaagactggaacaatagacgg
caatttacatcccccagtgacttccatgctgatggtgttaatgaatttttcatttcccag
gctctaatagaaaatacccgagcaaatgacatattgaagcaagcacccttcttggtgcca
tttacaagcagggttaaaatattcacttcacagttaacggcagttcggcaaagacaggag
tctcattctgtttttactaggaaccgattcagaatacgaagggatcatattttagaagat
gcctataaccagatgagtgcattgtctgaagaggatcttcgaggagttattcgtgtaacg
tttgtcaatgaatttggagttgaggaggctggtattgatggtggtggaattttcaaagat
ttcatggagaatattactcgagcagcttttgatgtccagtatggtttatttaaggaaaca
gctgatcacctgctctaccctaaccctggatctggaatgatacatgaacaacatctccaa
tttttccattttcttggaactcttctggcaaaggctatgtttgaaggaattcttgttgat
ataccatttgcaacatttttcttgagcaaattaaagcagaagtacaattatctgaatgac
ttaccttcattggacccagaactgtatcgccatcttattttcttgaagcattatgaaggt
gacatttcagatttagaactgtactttgttatcgtcaataatgaatatggagagcagaca
gaagaagagctacttcctggaggaaagaacttgcgtgtttccaatgagaatgttattacg
tttatacatcttgtggccaatcaccgtttgaattttcagatacgtcaacaaagttctcat
ttcttgagggggtttcagctgcttatacagaaagattggattgacatgtttaacgagcat
gaacttcagcttttgatatcaggttcagttgacagcttggattttgatgatctaagattg
aataccaattatgtaggcggctatcataaagaacattacgtcgtagagatgttctgggaa
gttctgaaaagcttttcattggaaaatcagaagaaatttttgaagtttgtcactgggtgc
tctcgaggacccctccttggattcagatatctcgagcctttattttgcatacaaagggct
gctggtagtgcctctgaggaggctcttgaccggttaccaacatcagctacttgtatgaat
cttctaaagcttccaccatatagaagcaaagagcaactggaaacaaagttgctatatgct
ataaatgccgatgctggttttgatttgagctga
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