Carya illinoinensis (pecan): 122317755
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Entry
122317755 CDS
T08745
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122317755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122317755
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
122317755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
122317755
NCBI-ProteinID:
XP_042990680
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All DBs
Position
8:7485650..7495269
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AA seq
791 aa
AA seq
DB search
MMIPDGIEDEEKWLAEGIAGIQHNAFYMHRALDANNLREVLKYSAQMLSELRTSKLSPHK
YYELYMRAFDELRKLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDVLKDLVEMCLGVQHPIRGLFLRCYLAQISRDKLPDIGSEYKGDSDTVVDAVDFV
LQNFIEMNKLWVRLKHQGPGRSREKLEKERSELRDLVGKNLHVLSQIEGVDLEMYKDTVL
PRILEQIVNCKDDLSQYYLMDCIIQVFPDEYHLQTLETLLGACPLLQPTVDIKTVLSQLM
DRLSNYAASSTDVLPEFLRVEAFAKLSSAIGRVIEAQVEMPIVGAITLYVSLLTFTLRVH
PDRLDYVDQVLGACVKKLSGKPKLEDSKAKKQVVALLSAPLEKYKDIVMALTLSNYPRVM
DHLDNETNKVMAMVIIQSILKNTSCISTADQVEVLFELIKGLVKDLDGTDVEELDEEDFK
EEQNSVARLIHMLYNDDPEEMLKIICAAKKNIMNGGPKRLPFTVPPLILSALGLIRRLQG
REGDLTGEEVPATPKNIFQILNQAIEALTTVPSPELALRLYLECAEAANDCDLEPVAYEF
FTQAFVLYEEEITDSKSQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDLDGIKDGERVLLCLKRALRIANAAQQMINITRGSSGPVTLFVEIL
NKYLYFFEKGNPQVTSAAIQALIELITTETKSDSTAPDAVSDPFFASTLRYIQFQKQKGG
AMSEKYDSIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatgataccggatggaattgaggacgaagagaaatggcttgccgaagggatcgccggc
attcagcacaacgccttttacatgcaccgcgctctggacgcgaacaatctcagagaagta
ctcaagtactctgctcagatgctgtcggagcttcgaacgtcgaagctttcacctcacaaa
tactacgaactctatatgcgagcgttcgatgaattgaggaagctggagatgttcttcaaa
gatgaaagcaggcacggggtttcgatcgttgatctttacgaacttgttcagcatgctggg
aacattttgcctaggctgtatctcctgtgtacggtaggatccgtgtacattaaatccaag
gaggctcctgctaaggatgtccttaaagatctcgtggaaatgtgtcttggcgttcaacac
ccgatacgtgggctttttttaagatgttatcttgctcaaatcagtagagataagctacct
gatattggttcagaatacaaaggagattctgacactgtcgtggatgctgtagactttgtg
cttcagaatttcattgagatgaataagctttgggtacgactgaaacatcagggacctggt
cggtcgagagagaagctggaaaaggaaaggagtgagcttcgtgatctggttgggaaaaat
ctccatgttctaagtcagatagagggtgtagacctcgaaatgtacaaagatactgttctt
cccagaatcttagagcagattgtcaactgcaaagatgacctttctcaatattatctgatg
gattgcataatccaggtctttcctgatgagtatcacttgcagacccttgagacattattg
ggtgcttgccccctgcttcagccaacagtagacatcaaaactgtgttatctcaattaatg
gacagattatccaattatgctgcttcaagtacagatgtattacctgaatttcttcgagtg
gaagcttttgcgaaattgagcagtgctattgggagggtgatagaagcgcaggttgaaatg
cccattgttggagccataactttatatgtctctcttcttacgtttactctccgtgttcat
cctgatcggcttgactatgtggatcaagtactgggagcatgtgttaagaagctttctggc
aaaccaaagcttgaggacagtaaagcaaaaaaacaagttgttgcacttttgagtgctccc
ttggagaaatacaaagatattgtgatggccttgacactttcaaattatccccgtgtgatg
gaccaccttgataatgaaacaaataaagtcatggcaatggttattatacaaagtatcctg
aaaaatacatcttgcatctctactgctgatcaggtcgaggtgttgttcgaattaattaaa
ggactcgtgaaggacttggatggaaccgatgtggaggagcttgacgaggaggattttaag
gaagaacaaaactctgttgctcgactcattcacatgctttataatgatgacccagaggaa
atgttaaagatcatatgcgccgcaaagaagaatataatgaatggaggaccaaaacgtctg
ccttttactgttcctcctcttatactttcagcacttgggttgattaggcgattgcaaggt
cgggagggggatttaactggagaagaagtgcctgcaactccaaagaacatttttcagatc
ttaaatcaggctattgaagctcttaccactgttccatctcctgaactggcattaaggtta
tacctggaatgtgctgaggcggcgaatgactgtgatcttgagcctgttgcttatgaattt
ttcacccaagcatttgtgttatatgaagaagaaattacggactccaaatcacaggtgact
gcgatacatctaataattggaactcttcagagaatgaatgtatttggtgttgaaaataga
gatactttaacacacaaggccacggggtattcggcaaagcttctaaagaaacctgatcag
tgccgagcggtttatgcatgttcacatcttttttgggttgatgatctggatggcatcaag
gatggagaaagggtcttgctttgcttaaagcgtgccttgaggattgcaaatgctgcccaa
cagatgatcaatattacgcgtggtagcagtgggccagtcacactctttgttgaaatactg
aataagtacctctatttttttgaaaagggaaacccccaagttacaagtgcagcaatccag
gctctgatcgaattaatcacaaccgagacgaagagtgactccacagctcccgacgctgtt
tcagatcctttctttgccagcacactgcggtacattcaattccagaaacagaaaggtggt
gcaatgagtgagaaatatgattccatcaaggtttga
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