Carya illinoinensis (pecan): 122317886
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Entry
122317886 CDS
T08745
Name
(RefSeq) acyl-CoA-binding domain-containing protein 4-like
KO
K20285
Rab9 effector protein with kelch motifs
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122317886
Membrane trafficking [BR:
cill04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122317886
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
122317886
NCBI-ProteinID:
XP_042990870
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Position
8:33453907..33458744
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AA seq
639 aa
AA seq
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MGSLGGETAKKKAMWLYPKVLGSNPSERWGHSACCSPGVVYVFGGCCGGLHFSDVLALHL
DSMVWNTLVTTGQGPGPRDSHSAVLVGHRMIVFGGTNGSKKLNDLHVLDLKSKEWIQPEC
RGTPPSARESHTATLIGDDKMVIFGGSGEGEANYLNDLHVLDLKTMKWTSPEVKGDVPVP
RDSHGAVSFGNKLFVYGGDRGDRYHGDVDMLDMETLTWLRLAIQGSSPGVRAGHAAVNVG
TKVYVIGGVGDKHYYNDVWVLDVSTCSWTQLDICGQQPQGRFSHAAILTNSDIAIYGGCG
EDERPLNEFLVLQLGAEHPNGRYNISMCKIFGNHWNQEKRNFQREAENNAKNALIRNNIA
LIKRAHEPESETKECFGFSSDMLHPKRRRTATSKPWEAELEQEEHSLSLSQHSSSSQSDQ
EQASLKKLNDSISISQGFHLFKQIPTNYQSKLRNIAQRTQQDIQFLGEHQNQLKLEQCLH
VVPTDQYSEVEQTSLGGRPAQSLIGAEVRGKVDGAFDAGLLMTATIGGKIFRGVLFAPAP
GVVSRGTILAQDPSPMSSQIAVNQPYPQNINHSGSFKSLQQAMKHSTPDSGHSFKQAQVV
RQYPLIRTAPSSTKELKLRSDLQGVVLTLGGPGSGHGIS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggggtctttgggaggtgaaactgcgaaaaagaaggcaatgtggctctatccaaaggtt
ttgggatccaatccgtccgagagatgggggcattctgcttgctgttctcctggggttgtt
tacgtgtttgggggatgttgtgggggtttgcatttcagtgacgtccttgcgctgcatctg
gattcaatggtttggaacactcttgtaaccacgggtcaaggacccggcccaagagacagc
cacagtgctgttcttgtggggcacaggatgatagtgtttggtggtacaaatggttctaag
aagttgaatgatcttcatgtgttagatcttaaatccaaagagtggatacaacctgaatgt
agagggactccaccatccgcccgtgaaagtcatactgccacgcttatcggagatgataag
atggttatatttgggggtagtggagaaggagaagcaaactacttgaatgatttacatgtt
ctagacctcaagactatgaaatggacttctcctgaggtgaagggtgacgtacctgttcct
agggatagtcacggtgcggtttcatttggtaacaagctttttgtttatggtggggaccgt
ggtgatcgttatcatggtgatgtagatatgcttgatatggagacactgacttggttaagg
ttggcaattcaaggatcctcgccaggtgttagagcaggtcatgctgctgtgaacgttggg
acaaaggtctatgtcattggaggggtgggagacaaacattattacaatgatgtttgggtc
ctagatgtgagtacttgttcatggactcagcttgacatatgtggccagcaaccacaagga
cgcttttctcatgcagccattcttacaaactcagacattgccatatatggagggtgtggg
gaggatgagcgtcctctcaacgagtttttagtcttgcagcttggggcagagcaccccaat
ggccgatacaacatttcgatgtgcaaaatttttggaaaccattggaatcaagagaagaga
aattttcaaagagaagcagaaaataacgcgaaaaatgcgctcatcaggaacaatatagca
ttaataaagagagctcatgaaccagaatcagagacaaaagaatgttttggctttagttca
gatatgttgcatccaaagagaagaagaactgccacttcaaagccgtgggaggctgaattg
gaacaagaagagcattctctttcactttctcagcattcgtcttcctcacaatctgatcaa
gaacaggcctcgcttaaaaaattgaatgattccatctcaatctctcaaggatttcatttg
tttaagcaaattccaaccaattaccaatctaagctcagaaatatagcccaaagaactcaa
caggatattcaatttctaggagaacatcaaaaccagctaaaattggaacaatgtcttcat
gttgttcctacagaccaatattcagaagtagagcagacatcattgggaggaaggcctgct
caatccctcattggtgctgaggtccgaggtaaagttgatggagccttcgatgctggtctc
ctgatgacagcaactattggtgggaaaatttttagaggggtattgtttgcaccggcacct
ggagttgtctcaagaggaacaattcttgcacaagatccttcacctatgtcaagccagatt
gcagttaatcaaccctacccgcagaacataaaccattcgggatccttcaagtcgttgcag
caggcaatgaaacattccaccccagattccggtcacagtttcaagcaagctcaagtggtt
cgacaatatccactcattagaactgctccgtcttcaaccaaagagctgaagctcagaagt
gatctccaaggtgtggttctaacactaggagggcctggaagtggccatggcatatcataa
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