Carya illinoinensis (pecan): 122317946
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Entry
122317946 CDS
T08745
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122317946
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122317946
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
122317946
NCBI-ProteinID:
XP_042990965
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Position
8:complement(6332158..6338871)
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AA seq
641 aa
AA seq
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MSAGVQLHIEDSHVTMDNGILQVTLSNPDGIVTGIKYNGIDNLLEVLNEEVNRGYWDLVW
SETGSTGTTGTFDVIKGTSFRVVVEKEEQVEISFTRLWYPSLQGKLVPLNIDKRFIMLRN
SPGFYTYAIYDHLKEWPPFNLPQTRIVFKLRKDKFHYMAIADNRQRFMPLPDDRLPGRGE
PLATPEAVLLVDPVEPEFKGEVDDKYQYSCENKDLQVHGWICTDPPVGFWQITPSSEFRS
GGPIKQNLTSHVGPVNLAMFLSAHYGGEDLVLKLKPNEPWKKVFGPIFMYLNSMSTDDHA
SHDPFFLWEDAKKQMKVEVESWPYHFPDSEDFPSSDQRGSVSGGLHIRDRYSSDECMIPA
SLAYVGLAPPGEVGSWQTECKGYQFWTVADACGYFSINHIRSGDYNLYAWIPGIIGDYRR
DVVITITEGCDINLGDLIFEPPRGGPTIWEIGIPNRSAAEFYIPDPNPKYINKLYVNHPD
RFRQYGLWERYADLYPDGDLVYTVGVNDYRKDWFFAQVTRKIDDDTYQGTTWQIKFQLQQ
VDTIGVYKLQLALATVNDSELQVRINDPPEENPPTFTTGVIGHDNTIARHGIHGLYRLYN
VEVPGALLLIGDNTIFLTQTSVTGPLQGIMYDYIRFEGPPS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaggggtgcaattgcatattgaggacagccatgtgacaatggataatggcata
ctccaagtaacattatcaaatccagatggaattgtgactgggattaaatataatggcatc
gacaatttgcttgaagttctcaacgaggaggtcaatagagggtactgggaccttgtatgg
agtgaaacaggaagtacaggaacaacgggtacattcgatgtgatcaaaggaacaagtttt
agggttgtagtagaaaaggaggaacaggtagagatctcattcacgaggctatggtatccc
tcgcttcagggaaagctcgtccccttaaatatagacaaaaggtttataatgctacgtaat
tctccgggcttctatacctacgccatctacgatcacttaaaggaatggcctcctttcaac
ctcccacagaccaggattgtcttcaaactcagaaaagacaagtttcactacatggcaata
gcggacaacagacaaagattcatgcctcttccggacgacaggttaccaggaagaggtgaa
cctctggctacaccagaagccgttttgctcgttgatcctgtggagcctgagttcaaggga
gaggtggatgacaagtaccagtattcatgtgagaacaaagatcttcaggtccatggatgg
atctgcaccgacccgcccgtcggtttctggcaaatcacacctagcagtgagtttcgatcg
ggtggacccatcaaacagaacttgacttcccatgtggggcccgtcaaccttgctatgttt
cttagcgctcattatggaggagaggatcttgtgctcaaactgaagcccaacgagccatgg
aagaaagtttttggccccattttcatgtaccttaattctatgtcgacagatgatcatgca
agtcatgacccatttttcctttgggaagatgctaaaaaacaaatgaaggttgaggttgaa
agctggccctaccattttccagattctgaggattttccatcatctgatcaaaggggcagt
gtcagtggtggattgcatattcgagacaggtattcaagtgacgagtgcatgattcccgca
agcttggcttacgttggattggcaccacctggagaggttggatcctggcaaacagaatgc
aagggttaccagttttggaccgtagcagatgcatgtggctatttctccattaatcacata
cgaagtggcgattacaatctttatgcatggattcctggaattattggtgactataggcgt
gatgttgtcattaccataactgaaggttgtgatattaacttgggagacctaatatttgag
ccaccaagaggtggtcctacaatatgggaaatagggattccaaatcgctctgctgctgaa
ttctacatccccgatcctaatccaaaatatatcaacaagctttatgtgaatcatcctgac
aggtttaggcagtacggattgtgggaaagatatgcagatctatatcccgatggggatttg
gtttacacagtaggcgttaatgattataggaaagattggttttttgctcaggttaccagg
aaaatagatgatgacacatatcaaggaaccacatggcaaatcaagttccaacttcaacaa
gtagatacaatcggagtctataaactgcaattggcacttgcaacagtgaacgactctgaa
ttacaggttcggataaacgatcctcctgaagaaaatcctcccacatttacaactggagta
attgggcacgacaacacaattgctagacatggaatccatggactgtaccggctgtacaac
gttgaagtaccaggagctttgctcctgattggggacaataccattttccttacacaaaca
tcggtcaccggtcctcttcaggggatcatgtatgactacattcgttttgaaggcccacct
tcctag
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