Carya illinoinensis (pecan): 122317960
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Entry
122317960 CDS
T08745
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cill01001
]
122317960
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122317960
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122317960
Protein kinases [BR:
cill01001
]
Serine/threonine kinases: Other
Other
122317960
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122317960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
LisH
WD40_WDHD1_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
122317960
NCBI-ProteinID:
XP_042990983
LinkDB
All DBs
Position
8:complement(1699976..1710276)
Genome browser
AA seq
1965 aa
AA seq
DB search
MDVAMDDGENQTQAEALAPAAESQPRSQGEEDGEKQARNEGDKLIANAQKLMEKITSSPE
NPSPFVLHALASILETQESRYMEEHDPSSNSGRSSHNIGRLGNLIRENDDFFELISLKFL
SETRYPTPIQAAAARLLLSCSQTWTYPHVFEEAVLENIKNWVIDDTARFPGEHHNCKSKK
ASNYEMLKSYSTGLLAVCLASGGQVVEDVLTSGLSAKLMRYLRVRVLGETSSQKDATHLT
EGKIVTGSTCTRDRDEGRGRVRQALETNYLDDLRIADERSLDGQSLERDQDRSIVGQGDG
EECWVNDREPTDALGDRVDTCEVDADGEVRRQSQELRDGKAKLWDFDENGRDDSSRRRVN
RGSTRSRCKGRVNEGGPENEQVLTSPGSGIRLGQGRSTKDRSSSKHLDVKKLPDARKTFG
RITSDVLAVERDDNDDCFQECRVGSKDISDMVKKAVIAAEAEARAANAPEEAIKAAGDAA
AEVVKSAAFEEFKSTSDEEAAVLAASRAACTVIDASNSIEVSRSSSSINDETMNPRCTET
GTNEDVEEYFILDSESLAQLREKYCIQCLEILGEYVEVLGPVLHEKGVDVCLSLFQRSSR
HNEGSKVAILLTDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRDAQTFFGLSSCLFTI
GSLQGIMERVCALPLDVIHQLVELAIQLLECNQDQARKNAALFFAATFVFRAVLDAFDAQ
DGLHKLLRLLNDAASVRSGVNTGALGFSSSGSFRNDRSPAEVLTSSEKQIAYHTCVALRQ
YFRAHLLLLVDSIRPNKNNRSTARNTPSIRAAYKPLDISNEAMDAVFLQLQKDRKLVPAF
VRTRWPVVEKFLSSNGHIILLELCQAPPVERYLHDLLQYALGVLHIVTLVPNSRKMIVSA
TLSNNRVGIAVILDAANSASSYVDPEIIQPALNVLVNLVCPPPAISNKPPLLAQGQHSVS
SLTPYGPTMENRDRNTERNISDRAVSMPSQSDSRERNGESSMADRLNATGVGTQFIGSTS
QTPVATATSGLVGDRRISLGAGAGCAGLATQLELGYRQAREAVRANNGIKVLLHLLQPRI
YSPPAALDCLRALSCRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTSGTEQGRWQ
VELSQAAIELIAIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHE
HLQASGLGATATALLKEAQLTPLPSLAAPSSLAHQTSTLEAPYTRLQWPSGRAPCGFLTK
KSKFSTRDEDTSLKFDSNVSFSKKKLLGFSPSFGLHSRNQLQFHDSQSVSARKVFSSSKQ
SSAPAIAAETQSESLPKPSLDTEYLCKTPIILPMKRKLSELKDVGSISFSGRRLHTGEQG
PQSPVCPTPSSLRKSNLLTDNIGLSTPTSNLRDQHWQSTPIGGLAGYMDENHYGNPHIGQ
VTPSSQLELLNDPQPSSTERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPK
RSLDAPSNVTARLGTREFRSIYGGVQGNRRDRQFVYSRFRPWRTCRDDAGALLTCIDFLG
DSSRLAVGSHSGGLEIFDSNSNNVLESCTSHQSPLTFVESYLSGETQLLLSSSSQDVRLW
DASSISGGPMHPFEGCKAARFSNSGSIFAALTVEPSPREILLYNIQTCQLESKLSDTSAS
STGRGHIYSLIHFSPSDAMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINS
EVWDLRKFRLLRSVPSLDQTMVTFNARGDVIYAILRRNLEDVMSAVHTRRVKHPLFAAFR
TVDAVNYSDISTIPVDRCVLDFAKEPTDSFVGLITMDDQDEMYSSARIYEIGRRRPTDDD
SDPDDAESEEEDEDDDDADVDSLLGPDLDGDADSDADDMSNDDYDDSVGDLDDDDDDDDD
GDFMLEGGTGLLEIVTEGDEDEDDSELVESFSSDEDDFVGNGFGY
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggccatggacgacggagaaaaccaaacgcaagccgaagctctggctcctgcc
gcggaatctcagcctcggtctcagggagaagaagacggagaaaaacaagcaaggaacgaa
ggcgacaagttgatcgcgaatgctcagaagctgatggagaagatcacttcttctcctgaa
aaccctagtcccttcgtactccatgcccttgcctccatcctcgaaacacaggaatcccgt
tacatggaagagcatgatccttcctccaatagtggccgttcttcacataacattggacgg
ctgggaaacttaatccgggaaaatgatgatttcttcgaattgatatctttgaagttttta
tcagaaacaagatacccaacccccatccaggcagctgctgctaggcttcttttaagctgc
tcacagacttggacttatcctcacgtttttgaagaagctgtcttagagaacataaaaaat
tgggtgattgatgacactgccagatttcccggtgaacatcacaattgcaagagcaagaag
gcctcaaattatgaaatgttgaagagctattctactgggcttcttgctgtttgtttggct
agtggtggtcaagtagtcgaagatgtcttgacttccggattgtctgccaagcttatgcgc
tatcttcgtgtgcgtgtacttggagagacaagtagccagaaagatgctactcatttaaca
gagggcaagattgtaactggttctacttgtacaagagatagagacgaagggaggggtagg
gttcggcaggctctggaaacaaattatttagatgatctgaggatagcagatgagagatcc
ttagatgggcagagtcttgaaagggatcaggatagaagcattgtaggacaaggagatgga
gaagaatgctgggtgaatgatagagaaccaactgatgcattgggtgatagggttgatacc
tgtgaggtagatgctgatggggaggtaagaaggcaaagtcaagaattacgtgatgggaag
gcaaaattgtgggattttgatgaaaatggccgagatgattcctcaaggcgcagagtgaat
cgtggatcaacaagatccagatgcaagggaagggttaatgaaggcggtccagagaatgaa
caggtgttaacctcaccaggatctggtattcgattgggacaggggcggagtacaaaagat
aggagttcttcaaaacatttagatgtgaaaaaattgccagatgctagaaagacttttggc
aggatcacatctgatgttttagctgtcgaaagagatgataatgatgactgcttccaagaa
tgtagagttggaagtaaagatatctctgatatggtaaagaaagcagttatagctgccgaa
gctgaagcaagagcagccaatgcacctgaagaagctatcaaagcggcgggtgatgctgct
gctgaagttgtcaaaagtgcagcttttgaggaatttaaaagcacgagtgatgaagaagct
gcagttttggctgcttccagagctgcatgcactgttattgatgcttctaattcaattgaa
gtttcaaggagttctagtagcatcaatgatgagacaatgaatccacgctgtacagagacg
ggaactaatgaggatgttgaagaatatttcatcctggattctgaatctcttgcacagctg
agagaaaaatactgtattcagtgccttgaaatacttggagaatatgttgaagttcttggg
cctgtacttcatgaaaagggtgtcgatgtctgcctctcactatttcaacggagttccaga
cacaatgagggatcgaaagttgccattcttttgactgatgtaatgaagctaatctgtgca
ttggctgctcaccgaaaattcgctgcactttttgtggatcggggtggcatgcagaaactg
cttgctgtccctagagatgctcagaccttcttcggtctttcttcttgcttatttacaatt
ggttctctgcagggaataatggaacgtgtgtgcgctcttcccttagatgttattcaccag
ttggttgagttagccatccaacttcttgagtgcaatcaggaccaagctagaaaaaatgcc
gccttgttttttgctgccacatttgtcttccgagcggttcttgatgcctttgatgctcag
gatggtttacacaaattactgcgccttctaaatgatgctgcctcagttagatcaggagta
aatactggagcattaggattttccagttcaggatccttccgaaatgatcgttcgcctgcg
gaagtactgacatcatcagagaaacagatagcttatcacacctgcgttgctttgcggcaa
tattttagagctcaccttcttttgcttgtggattctatccgtccaaataaaaacaatcga
agtacagcccggaatactccaagcataagggcagcctacaagccacttgacatcagtaat
gaagctatggatgcagtgtttctgcagttacaaaaggatcgaaaactggttccagcattt
gtaagaactcgctggcctgtggttgagaagttcttaagctctaatgggcatattatcttg
ttggaattgtgtcaggccccacctgttgagcgctatttgcatgatttgcttcagtatgca
ttgggtgttttgcacattgttacactggtacccaacagccgcaagatgattgtaagtgcc
acattaagcaacaatcgtgttggtatagcggtgattttggatgcagcaaatagtgctagt
agttatgtggacccagagatcatccaaccagccctaaatgtgttagtcaatcttgtttgt
ccaccaccagcaatcagcaataaaccacctttacttgcacagggtcagcattctgtttct
tctctaaccccatatggtcctacgatggagaatagagatagaaacacagaacgcaatatc
tcagatagagctgttagtatgcccagccagagtgattcaagagagcggaatggggaatct
agtatggcagataggctaaatgccaccggagtcggtacacagttcatcggtagcacttca
caaactcctgttgccacagccacttcaggacttgttggagatcgtagaatatctttaggt
gctggagcaggttgtgccggccttgctacacagttggaactagggtatcgtcaagcaaga
gaggctgtacgtgccaacaatgggataaaggttcttcttcatctcctccagccacgcata
tattcacctcctgctgctcttgattgtcttcgtgccctctcttgccgagttctgcttggt
ctggccagagatgatacaattgcacatatattgacaaagcttcaggttggaaaaaagtta
tcagaactgattcgagattcaggcagccaaacgtctggaactgagcaaggcaggtggcaa
gtcgagctttcccaggctgcaattgagctgatagcaattgtgacaaattcaggccgtgca
agtacgctagcagctacggatgctgccacccctactttgaggcgcatagaaagagcagct
atagctgctgctacgcctattacttatcattccagggagcttttacttctaatccatgaa
cacctacaggcatctggtttgggtgcaactgctacagcactgttgaaagaggcccagttg
actcctctgccgtccttggcagccccatcatctcttgctcaccaaacctccaccctagaa
gctccctatactcgactccaatggccctctggtcgagccccttgtggatttctcactaag
aaatctaaatttagcacacgggatgaggatacaagcttgaagtttgattcaaatgtatct
ttttcaaagaaaaaactattaggtttctcacctagttttggtttgcactcaagaaatcag
ttgcaattccatgattcccagtcagtatctgccaggaaagtcttcagttcttcaaaacaa
tcttctgctcctgcaattgcagcagaaactcaatcagagtccttgccaaaacctagtctt
gatacagaatacctatgtaagactcctattatattgccaatgaagcgaaaattgtcagag
ttgaaggatgttgggtcgatttcgttctccggaaggcgactccacacaggtgagcaagga
cctcagtctccagtttgtcctacacccagtagtcttcgtaaaagcaatctactgactgat
aatattggactttctacaccaacttctaaccttagagatcagcattggcaatcaacacca
attggtggcttggcaggttatatggatgaaaaccattacggtaacccccatataggtcag
gtgacaccatcctcgcaacttgagcttttaaatgatccccagcccagcagcacagagagg
ttaactctagactctcttgttgttcaatatctgaagcaccagcatcgccaatgccctgcc
cctataaccactcttccaccactctctctcttgcatccacatgtctgtcctgaacctaaa
cgaagccttgatgccccatcaaatgtaacagctcgacttggtacacgggagtttagaagt
atatatgggggggtacagggaaatcgaagagatcgccagtttgtttatagtagatttaga
ccttggagaacttgtcgggatgatgctggtgcacttttgacatgcattgattttcttggg
gactcttcccgtcttgcagttggcagccactcgggagggctcgaaatttttgactctaac
agtaacaatgtgttggagagctgtacaagccatcagtctcctttgacatttgttgagtcc
tatctttctggtgagacacagctgctgctttcgtcgagctcccaggatgtaaggttgtgg
gatgcatcttcaatctcaggtggaccaatgcatccatttgaagggtgtaaggctgcaagg
tttagcaactctggaagcatttttgcagccttgacagtagagccctctccacgggaaatt
ctcctctacaatatccagacctgccaattggaatcaaagctatcagacacgtctgcaagt
tctacaggccgggggcatatatattctctcatacacttcagcccttcggatgctatgctg
ctatggaacggggtcttgtgggatcggcgggtttctggtcctgttcatcgctttgatcaa
tttacagattatggaggtggcggctttcatccagctgggaatgaggtaattataaactcg
gaggtttgggatctccggaagtttaggctcctccgaagtgtaccttcattagaccaaacg
atggtaacatttaatgcacgtggagatgtaatttatgcaatacttcggagaaatcttgag
gatgtaatgtcagcagttcacacacggcgagtcaagcatcctctctttgctgcttttcgc
acggttgatgcagtcaactactctgacatttccaccatacctgtagatcgttgtgtcctt
gactttgcaaaagagccgacagattcctttgtagggttgattacgatggatgaccaagat
gagatgtactcttcagctaggatttatgaaattggacgtcgaaggccaacagatgacgat
tccgatcctgatgatgccgagagtgaggaggaagatgaggatgatgatgatgctgatgtg
gactccttactgggcccagatcttgatggggatgctgatagtgatgctgatgatatgagt
aatgatgattatgatgatagtgttggtgaccttgatgatgacgacgatgacgatgatgat
ggagatttcatgctggaagggggaacgggattactggagattgtgaccgagggtgatgag
gatgaggatgatagcgaattggttgaatcattcagtagcgatgaggatgattttgtgggt
aacggttttggttattaa
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integrated database retrieval system
