Carya illinoinensis (pecan): 122318044
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Entry
122318044 CDS
T08745
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122318044
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122318044
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
122318044
NCBI-ProteinID:
XP_042991106
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Position
8:complement(6288147..6295038)
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AA seq
640 aa
AA seq
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MPAGVQLHIKDSLVTMDNGILQVTLSNPDGIVTGIKYNGIDNLLEVLDEEVNRGYWDLVW
SETGSTGTTGTFDVIKGTSFRVVVEKKEQVEISFKRLWDPSLQGKFVPLNIDKRFIMLRN
SPGFYTYAIYDHLKEWPPFNLPQTRIVFKLRKDKFHYMAIADNRQRFMPLPDDRLPERGE
PLATPEAVLLVDPVEPEFKGEVDDKYQYSCENKDLKVHGWICTDPPVGFWQITPSSEFRS
GGPIKQNLTSHVGPFNLAMFLSAHYGGEDLVLKLKPNEPWKKVFGPIFMYLNSKSRDDHA
SHDPFSLWEDAKKRMKIEVESWPYHFPASEDFPSSDQRGRVSGRLHIRDRHASDECIPAN
LAYVGLAPPGELGSWQTECKGYQFWTVADARGHFSINHIRSGDYNLYAWIPGIIGDYRRD
VVITITEGCDINLGDLIFKPPRDGPTMWEIGIPNCSAAEFYIPDPNPKYINKLYVNHPDR
FRQYGLWERYADLYPNGDLVYRVGVNDYRKDWFFAQVTRKVDDDTYQGTTWQIKFQLHRV
DTIGVYKLRLALATVNDSELQVRVNDPPEANPPTFTTGVIGHDNTIARHGIHGLYRLYNV
EVPGALLLIGDNTIFLTQTSVTGPLQGIMYDYIRFEGPPS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgggggtgcaattgcatattaaggacagccttgtgacgatggataacggtata
ctccaagtaacattatcaaatccagatggaattgtgactgggattaaatataatggcatc
gacaatttgcttgaagttctcgacgaggaggtcaatagagggtactgggaccttgtctgg
agtgaaaccggaagtacaggaacaacgggtacattcgatgtgatcaaaggaacaagtttt
agggttgtagtagaaaagaaagaacaagtagagatctcattcaaaaggttatgggatccc
tcgcttcagggaaagttcgtccccttaaatatagacaaaaggtttataatgctacgtaat
tccccgggcttctatacctacgccatctacgatcacttaaaggaatggcctcctttcaac
ctcccacagaccaggattgtcttcaaactcagaaaagacaagtttcactacatggcaata
gcggacaacagacaaagattcatgcctcttccggacgatcggttaccagaaagaggtgaa
cctctggctacaccagaagcagtcttgctcgttgatcctgtggagccggagttcaaggga
gaggtggatgacaagtaccagtattcatgtgagaacaaagatcttaaggtccatggatgg
atctgcaccgacccgcccgtgggattctggcaaatcacacctagtagtgagtttcgatcg
ggtggacccatcaaacagaacttgacttcccatgtggggcccttcaaccttgctatgttt
ctcagtgctcattatggaggagaggatcttgtgctcaaactgaagcccaacgagccatgg
aagaaagtttttggccccatcttcatgtaccttaattctaagtcgagagatgatcatgca
agtcatgacccattttccctttgggaagatgctaaaaaacgaatgaagattgaagttgaa
agctggccctaccattttccagcttccgaggattttccatcatctgatcaaaggggcagg
gtcagtggtagattgcatattcgagacaggcatgcaagtgacgagtgcattcccgcaaac
ttggcttacgttggcttggcaccacctggagagcttggatcctggcaaacagaatgcaag
ggttaccaattttggaccgtggcagatgcacgtggccatttctctattaatcacatacga
agtggcgattacaatctttatgcatggattcctggaattattggtgactataggcgtgat
gttgtcattaccataactgaaggttgtgatattaacttgggagacctaatatttaagcca
ccaagagatggtcctacaatgtgggaaatagggattccaaattgctctgctgctgaattc
tacatccccgatcctaatccaaagtatatcaataagctttatgtgaatcatcccgacagg
tttagacaatatggattgtgggaaagatatgcagatctatatccaaatggagatttggtt
tacagagtgggcgttaatgattatagaaaagactggttttttgctcaggttaccaggaaa
gtagatgatgacacatatcaaggaaccacatggcaaatcaagttccaacttcaccgagta
gatacaattggagtctataaactgcgattagcacttgcaacagtgaatgactctgaatta
caggttcgggtaaacgatcctcctgaagcaaatcctcccacgtttacaactggagtaatt
gggcatgacaacacaattgccaggcatggaatccatggactgtataggctgtacaacgtt
gaagtaccaggagctttgctcctgattggggacaataccattttccttacacaaacatcg
gtcaccggccctcttcaagggattatgtatgactacattcgttttgaaggcccaccttcc
tag
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