KEGG   Carya illinoinensis (pecan): 122318069
Entry
122318069         CDS       T08745                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122318069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122318069
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122318069
 Complex B
    122318069
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 RRM_7 CTK3
Other DBs
NCBI-GeneID: 122318069
NCBI-ProteinID: XP_042991133
LinkDB
Position
8:661188..677297
AA seq 982 aa
MSSFSITRKKTPFQKHREEEEARKKRAEDETARLYQEFVESFQGDITPGSKTFVRGGTIN
PNEKLKAVSEGEKSKDGVSVPKKGSRYVPSFIPPPLATKGKESEKKKEDDKPKEKEKGKS
RNIDHFMEELKHEQEMRERRNQERDQWRDGRHNENSAPSSRFDELPDDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGSTVILSGPS
GPPVTSVPSQNSELVLTPNVPDIMVVTPNDDHLRHVIDTMALYVLDGGCAFEQAIMERGR
GNRLFNFLFDLGSKEHTYYVWRLYSFVQGDTLQRWRTEPFIMITGSGRWIPPTLPTVKSP
EHEKESGSTFAAGRSRRVELERTLTDAQRDEFEDMLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDVLHNSSAPVKNASAYRTRFEATLPDIMESF
NDLFRSITGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRPGSSGVIPYHSIC
GDAPELEKKNRSEDTGDGAKVNQDAALAMDKGAAMRELMNLPLTELERRCRHNGLCLAGG
REMMVARLLSLEEAEKQRVYEIDDELKYAQSHSSSGRYSHSRREMTIEAEQVGLSGWSHQ
GEDDLPSQGEESVPLAPTLPIPQPELKAFSKKEKIEPILPASKWARDDDESDDEERGSAK
GLGLSYSSSGSENAGDDPGKADEMEFAVGTSIPTQPDSGMNEEQRQKLRRLEVALIEYRE
SLEERGIKSLDEIEKKVAIRRQQLQSEYGLFDSNSDSSGNTAARTSSERRDRRNDARDTS
RKRHRSESQSESPPWKFLNRDKEREHALDRDRERHRDRDRTHDFENERGRERDSEKSGSR
ERDDHERDRGRERDRDRRRRPK
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgagttctttctccattacgcggaagaagacgcctttccagaagcacagagaggaagaa
gaggcaaggaaaaagagagcagaagatgaaacagctcgactataccaagagtttgtggaa
tcatttcaaggagatattacgcctgggtcgaagacttttgttcgaggaggaacaataaac
cccaatgagaaactgaaggcagtttctgaaggtgaaaagtccaaagatggggtgtctgtt
ccaaagaagggaagtaggtatgttccatctttcataccacctcccttggcaactaaaggg
aaagaatctgaaaagaaaaaggaggatgacaagccaaaggaaaaagaaaaaggaaagtct
cggaatatagatcatttcatggaggaactgaagcatgagcaggagatgagggagaggcga
aatcaagagcgtgatcagtggcgtgatgggcgccacaacgaaaattctgctccatctagt
cgctttgacgaactgcctgatgattttgacccaagtggaaagcttcccggatcatttgat
gacggcgatccgcaaactactaatctctatgttggaaatctctccccccaggttgatgaa
aattttcttctgcggacttttggaagatttggacccattgctagtgtgaagataatgtgg
cctaggactgaagaggagcgtaggcggcaaagaaattgtggctttgtagctttcatgaat
agagctgatggacaggctgcaaaggatgaaatgcaaggagttgttgtttatgaatatgag
ttgaagattggatggggtaagtcggtcgctctaccttcgcaagcactacctgctcctcca
ccaggacatatggcgatcaggagtaaggagggtagcactgtaattttgtctggtccatca
ggcccaccagtcacttctgttccaagtcagaattctgaattggttcttaccccaaatgtt
cccgatataatggttgttacgcccaatgacgatcatctccgccatgtaattgacacaatg
gctctctatgttctggatggagggtgtgcctttgaacaagctattatggagagaggtcgt
gggaatcgtctcttcaacttcttgtttgatcttggctcaaaggaacatacttactatgtc
tggcggctctattcctttgttcagggtgatacccttcaaagatggcgaacagagcctttt
attatgataactggaagcggaagatggattccaccaactctgccaacagtaaaaagccca
gagcacgaaaaggagtctggctccacatttgctgcgggaagaagcaggcgggtggaactg
gaaagaacacttactgatgcacagagggatgagttcgaggatatgctgcgtgctttaaca
ttagagaggagtcagataaaggaagctatggggtttgccctggataatgctgatgcagct
ggagagatagttgaagttctgacggagtctttgacacttaaggaaactcccattccaacc
aaagttgctaggcttatgcttgtttctgatgttcttcacaatagtagtgctcctgtaaag
aatgcctctgcgtaccgcaccagatttgaagcaactttacctgatattatggagagtttt
aatgatttgtttcgtagcattactggaaggattactgctgaggctcttaaggaacgggtg
ctcaaagtgttgcaagtatggtcagactggtttttgttttcggatgcatatgttaatggt
ttacgagctacatttctccgacctgggagctctggtgtcattccatatcattccatatgt
ggtgatgcacctgaactagaaaaaaaaaatagatctgaagatacaggtgatggggctaag
gtcaaccaagacgctgcattggcaatggacaaaggagcagcaatgagggagctaatgaat
cttccgctcactgagctagagagacgttgcagacataatggattgtgtcttgctggtggt
agagaaatgatggttgcacggttgctaagtctggaagaggctgaaaaacaaagggtctat
gaaattgatgatgagttgaaatatgcacagagtcattcaagttctggcagatattcccac
agccgtagagaaatgactattgaagcagagcaagtgggtctgtctggatggagtcatcaa
ggggaggatgatttgccatcacaaggtgaagagtctgttcctttggctccaacccttccc
attccgcagcctgaactaaaagctttctcgaagaaagagaaaattgaacctatcctgccg
gcatctaaatgggctcgagacgatgatgaaagtgatgatgaagaaagaggtagcgctaag
ggtctggggttgagctactcatcttctggaagtgagaatgctggtgatgatcctggtaag
gctgatgagatggagtttgcagttggtacgagcatcccaacacaacccgattctggaatg
aatgaagagcaaagacaaaagctgagacgtctagaggtagccttgatagaatatcgtgaa
tcccttgaagagcggggaatcaaaagtttggatgaaattgagaagaaggttgccatccgt
cggcaacagctacaatctgaatatgggttatttgattctaacagtgattcttcagggaac
actgcagcaagaacatcttctgaaaggagggacagacggaatgatgctcgagatacttca
agaaagcggcaccgcagcgaaagccaaagtgagagcccaccatggaaattcttaaaccga
gacaaggaaagggaacatgcattagacagggacagagagaggcatagggatagagataga
actcatgattttgaaaatgagagagggagggagcgggacagtgagaagagtggaagcaga
gagagggatgaccatgaaagggatcgaggcagagaaagagacagagataggaggagacgg
ccaaagtga

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