Carya illinoinensis (pecan): 122318105
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Entry
122318105 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122318105
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122318105
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122318105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122318105
NCBI-ProteinID:
XP_042991177
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All DBs
Position
8:512955..515014
Genome browser
AA seq
185 aa
AA seq
DB search
MDAPPANDFCSVCHSNFKIPCQANCSHWFCGDCIMLVWHHGSAIHPCKCPLCRRQITLLV
PGEASLSQRQDPEVAEILGKVQTYNRLFGGHTNGLFQSMQDLPFLLRRLLRELMDPQRSL
PLVIRARVYIAMIVSVVYIISPIDIIPEGILGIVGLLDDLLIVLICFLYVAAIYRSILCF
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcctccggcgaacgatttctgctcggtgtgccatagcaatttcaagatccct
tgtcaagccaattgttctcactggttttgcggggattgtataatgcttgtttggcatcat
ggatcagcaatccatccgtgtaaatgtcccttgtgtcgtcgtcaaattaccttgttggtt
cctggagaggcttcattaagtcagcgacaagatcctgaggtcgctgagattcttggaaag
gttcaaacatacaatcgtctttttggagggcataccaatggcctttttcagagcatgcag
gatcttccatttctccttcgaaggttgttacgagaactgatggatcctcaaagatccctt
cctcttgttatcagagcccgtgtctacatagcaatgattgtaagtgtcgtctacataatc
agccccattgacattattccagaaggaatattgggaatagttggcctcttggatgatctc
cttatagtgctcatctgcttcctctatgttgctgccatttaccggtccatactttgtttc
cgtcatggaggttcatga
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