Carya illinoinensis (pecan): 122318139
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Entry
122318139 CDS
T08745
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
122318139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122318139
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
122318139
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zn-ribbon_14
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-GeneID:
122318139
NCBI-ProteinID:
XP_042991252
LinkDB
All DBs
Position
8:complement(8124458..8129608)
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AA seq
358 aa
AA seq
DB search
MEEADGNGKSMKGRGRLCCICNKRRAALKRPKTLEQICRECFYEVFEEEIHQVIVENQLF
KPGERIALGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNE
IQYGLPLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGH
NADDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKRLDY
FSTECIYSPNAYRGFVREFIKDLERIRPRAILDIIQSGEDFRISTSTKMPEQGTCERCGY
ISSQKWCKACVLLEGLNRGLPKLGIGRSRGLSDDRKKGIKENIGTKSIESKQCGTLDF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagccgacggaaacggaaagtccatgaagggcaggggtcgtctgtgctgcatc
tgtaacaagagaagggccgccctcaaaagacccaaaacccttgagcagatttgcagggag
tgtttctatgaggtctttgaggaggagatccatcaggtaattgtggagaaccaattattc
aagcctggtgaacgaattgctcttggcgcctctggtggaaaagattccacagtccttgct
tatgtattatcagaattgaaccggcgacacaattatggtctggatctcttcctcttgtca
gttgatgagggcattacagggtacagggatgactctcttgaaactgtcaaacgaaatgaa
attcagtatggactaccactaaaaattgtctcatacaaggatctgtacgggtggacaatg
gatgaaatcgtgaagatgataggtttaaagaataattgcacattttgtggtgttttccgc
cgccaggcccttgatcgaggtgctgcgttgttgaaagtagacaagcttgctactggacat
aatgcagatgatattgccgaaacagttcttttgaacattttacgaggagatattgcaaga
ttgagtagatgcacttcaataatcactggtgaagatggaccaattccaagatgcaaacct
tttaagtacacatatgagaaggagattgttatgtatgcatatttcaagaggctggactac
ttctccactgaatgcatttactctccaaacgcatatcgtggttttgtccgtgagttcata
aaggatttggaaagaatcagacctagggccatacttgatataatccagtcaggggaggat
ttcaggatttccacttccacaaaaatgccagagcaagggacttgtgaacgctgtggctac
atttcgagccagaaatggtgtaaagcttgtgttttgctcgagggactgaatcggggattg
ccaaagctgggcattgggcggagtcgaggtcttagtgatgatcgtaagaagggaataaaa
gaaaatattggaacaaagagtatcgagagcaagcaatgtggaactttagacttctga
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