Carya illinoinensis (pecan): 122318385
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Entry
122318385 CDS
T08745
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122318385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122318385
Membrane trafficking [BR:
cill04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
122318385
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Ortholog
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GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
GIT1_C
Syntaxin-18_N
Prominin
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
122318385
NCBI-ProteinID:
XP_042991608
LinkDB
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Position
8:complement(1563467..1567094)
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AA seq
335 aa
AA seq
DB search
MHVKSAKSFRDRTQEFQSIAEQLKKSFSSGSVPDGPSSSSKSEEQRSAVAIQSEFNRRAS
KIGYGIHQTSQKLAKLAKLAKRTSVFDDPTKEIQELTVLIKQDITALNSAVVDLQLHCNS
RNGSGNTYSDTNSHSATVVDDLKNQLMSTTKEFKDVLTLRTENLKVHENRRQLFSSTASK
DSINPFVRQRPLAARSAASTSNAPPLPWANGTPSSSQSLPRKQMDGESQPLLQQQQQLVP
LQDTYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQG
ALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcaaatctgcaaaatcgttccgggatcggacacaggagttccagagtatagct
gagcagcttaagaagtctttttcatcaggatcagtgccagatgggccgagtagtagctca
aagtcagaggaacaacgttctgcggttgcgattcagtctgagtttaacaggagggcttcc
aagatcgggtatgggatacaccagacatcgcagaagctggcaaagctggctaagttggca
aagaggacttcagtttttgatgaccccaccaaggaaatccaggaactgacggtgcttatc
aagcaagatattactgcactaaactctgcagtggtagaccttcagcttcactgcaactcc
agaaacgggagtgggaatacctatagtgataccaatagtcactcagccacagttgtagat
gacctgaaaaatcagctgatgagcaccacgaaagagttcaaagatgttctcaccttgaga
acagagaacttgaaggttcacgagaacagaagacagttgttttcttctacggcttctaag
gactctataaatccttttgtgcgtcagcgtccactggctgcccggtcagctgctagtacc
tcaaatgcccctcctctgccttgggccaatgggacaccatcctcctcccaatcgcttcct
aggaagcagatggatggagagagtcagccattgctacagcaacaacagcagcttgttcca
ttgcaagacacttacatgcagagcagagctgaagctcttcaaaatgtagagtccacgatt
catgagctcagcagcatcttcaaccagctggcaaccctggtttctcagcaaggagagatt
gccatcaggattgatgagaacatggatgacacgttggcaaatgtggagggggcacaaggg
gccctgctcaagtatttgaacagcatatcatctaataggtggctgatgatcaagatattc
tttgtactgatctttttcctcatggtttttctattttttgtggcatag
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