Carya illinoinensis (pecan): 122318395
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Entry
122318395 CDS
T08745
Name
(RefSeq) two-component response regulator ARR1-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122318395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122318395
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122318395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
122318395
NCBI-ProteinID:
XP_042991629
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All DBs
Position
1:complement(39269621..39273788)
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AA seq
693 aa
AA seq
DB search
MNPSNGKGSMSTASSSAAWKAGDVVPDQFPAGLRVLVVDDDPTCLVILEKMLRACLYEVT
KCNRAEIALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVV
MKGVTHGACDYLIKPVRIEALRNIWQHVVRKRKNEWRELEQSGSVEEGDRQQKPCDDLDY
SSSANEGNWKSSKKRKDEEEETEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVP
KKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHHSSLNNSFMSPEATFGPMSSLNG
LDLQTLAVTGQLPAQSLANLQAAGLGRSAAKSGIPMPLIDQRNLFSFENPKSRFGEGQQQ
HLSSSKPMNLLHGIPTTMEPKQLASLHQSAQSLGNMNVQVNSHGAQSSSLLMQMAKTQSR
GNILNESAGSHLPTLPSSIGQPIISNGIAGGVIGRNEIGDNGRGTGYNQVAQTSSMLSFP
MNHTTELAGNNFPIGSTPGISNVTSKGAFHEEVNSEIKSSAGFVPSYDIFNDLHPQKSQD
WELQNVGLHFNASQNANPVQGNFNASQNANPVQGNLDVSSSVLVHQGYSSRQQGSGQNRN
ISAMGRTMFSGLEATGQGNEQIMDQLLNNLIVDTPVRVKYERFSDTSSQNALFADPFGQE
DLMSALLKQQQGNTGPAEPDFDFDGYSIDNIPV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgagtaacgggaagggatcgatgtcaacggccagttcaagcgcagcttggaaa
gccggtgacgtcgttccagaccagttcccggcggggctacgtgtgttggtcgtagatgat
gaccccacatgccttgtgatcttggagaagatgctcagggcttgtctttatgaagttacc
aaatgcaatagagcggagatcgcattgtcgctgcttcgagagaacaaaaacgggtttgat
attgttataagcgatgttcacatgcccgacatggatggattcaaactcctggagcacatt
gggctggagatggacctgcctgtaatcatgatgtcagcagacgatgggaaaaatgttgtc
atgaagggcgtgactcatggtgcttgtgattacctaatcaaaccagtgcggatcgaagca
ttgaggaacatatggcagcatgtagttcggaagagaaagaacgagtggagggaattggag
cagtcaggtagcgtagaagagggagatcggcagcaaaaaccgtgtgatgatctggattat
tcatcctcagccaatgaagggaactggaaaagctcgaagaagaggaaggatgaggaggaa
gaaacagaggagagggatgactcatccacattaaagaagccccgggtagtttggtcggtt
gaactccatcaacagtttgtggctgctgttaatcaactaggcattgacaaggcagtccct
aagaaaattctggagttgatgaatgttcctgggctcactagagaaaatgttgccagtcac
cttcagaaatatcgcctgtatcttagaaggcttagtggtgtttcacagcaccacagtagt
ttgaataattccttcatgagtccagaagcaacttttggaccaatgtcttcgctcaatggg
cttgaccttcaaacacttgctgttactgggcaacttccagcacaaagtcttgctaatctt
caagcagcaggacttggtaggtctgctgcaaaatctggcattcccatgccgctgattgat
caaaggaatctatttagctttgaaaaccctaagtcaaggtttggagaggggcaacagcaa
catctgagcagcagcaaaccaatgaatttacttcatggaattccaacaactatggaaccg
aagcagcttgccagtttgcatcaatctgcacaatcactagggaacatgaatgtgcaagtc
aattcccatggagcacagagtagctctttgctgatgcagatggctaaaacacaatcgaga
gggaatatactaaatgaatctgctggcagtcatcttcctacgcttccatcatccataggg
cagcccattatttcaaacgggattgcaggtggggttattggaagaaatgagattggtgat
aatggcagagggacagggtataatcaagttgcccaaacatcttcaatgctaagttttcct
atgaaccacaccacagaattagctggcaacaatttccctattggaagtactcccgggata
tccaatgtcacatccaaaggagcatttcacgaagaggttaactcagaaataaaaagttca
gcaggatttgtgcccagttatgacattttcaatgacctgcacccacaaaaatcacaagat
tgggaattacagaatgttggcttgcacttcaatgcctctcaaaatgcaaaccctgtacag
ggcaacttcaatgcctctcaaaatgcaaaccctgtacagggcaaccttgatgtgtcatca
tcagttttagttcatcaaggatattcttctagacaacaaggtagtggacagaacaggaat
atatcggccatgggcaggacaatgttctcagggttggaagctactggtcaagggaatgaa
caaattatggatcaactgcttaataatcttattgttgacactcctgtccgggtcaagtat
gaacgattttctgatacaagtagtcagaatgccctctttgcagatccttttggtcaggaa
gatctcatgagtgcacttctcaaacagcagcaagggaatactggaccagccgaacctgat
ttcgactttgatggatactccatcgacaatattccagtatag
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