Carya illinoinensis (pecan): 122318413
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Entry
122318413 CDS
T08745
Name
(RefSeq) transcription factor HY5-like
KO
K16241
transcription factor HY5
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122318413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122318413
Transcription factors [BR:
cill03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
122318413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Gal4_dimer
GAS
FlaC_arch
SHE3
ATF7IP_BD
Nnf1
Mei4
TSC22
GIT_CC
DMPK_coil
DUF3563
GrpE
APG6_N
DUF7365
FmiP_Thoc5
DivIC
V_ATPase_I
Phlebovirus_NSM
DUF1192
YabA
Motif
Other DBs
NCBI-GeneID:
122318413
NCBI-ProteinID:
XP_042991654
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Position
8:complement(1305192..1307845)
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AA seq
168 aa
AA seq
DB search
MQEQATSSIAANSLPSSSERSSSSALQLEVKEGLESDEEIRRVPEIGGESAGTSASRRDS
GSGAGPDRLQVAGEGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLTDLETRVK
ELEKKNSELEERLSTLQNENQMLRHILKNTTASRKGGSNGANANDGSL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagcaagcaacgagttccattgcggcgaattctctgccttccagcagcgaaaga
tcttcgagctccgctcttcaactcgaagtcaaagaaggtttggagagtgatgaggagatc
aggagagtaccagagataggtggtgaatctgcggggacctcagcctcgagacgagacagc
ggttcaggggcaggtccagaccggcttcaagtggcaggggaaggtcagaggaaaagaggc
cgaagtccagctgacaaagaaagcaagcgtctaaagaggttgctgaggaacagagtttcg
gctcagcaagcaagggaaaggaagaaggcatacttgactgacctggaaacgagggtgaaa
gagttggagaagaagaactctgagcttgaagagaggctgtccaccttgcagaacgagaat
cagatgcttagacatatattgaagaacacaacagcaagcaggaaaggaggaagtaatggt
gctaatgccaatgatgggtctttatga
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integrated database retrieval system