KEGG   Carya illinoinensis (pecan): 122318415
Entry
122318415         CDS       T08745                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122318415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122318415
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122318415
 Complex B
    122318415
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 122318415
NCBI-ProteinID: XP_042991656
LinkDB
Position
8:complement(9291699..9294586)
AA seq 280 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEED
QAAAALHALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGREL
RRKLFGRYRGFRISRSRSRSLSPRHKREYRDYRDRDRDYRGNGKRSSRDRYDRDGGGGGG
RRRHGSPRRSRSRSPVPGREGSEERRARIEQWNREREDRP
NT seq 843 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcgatcttcggcaccgagaaggacagggtgaactgccccttc
tacttcaagatcggcgcatgtcgtcatggcgatcgttgctctcgcctccacaatcgcccc
actatctcgccgaccctcctcctctccaacatgtaccagcgcccggacatgatcacaccc
ggcgtggacgcccagggccagcccatcgaccctcgcaagatccaggagcacttcgaggac
ttctacgaggatatcttcgaggagctcggcaaattcggggagatcgagagcctcaatgtc
tgcgataacctcgccgaccacatgatcggcaacgtctacgttcagttcaaggaggaagac
caggccgccgcagcattgcacgccttgcagggacgcttctactcgggccgccccattatt
gccgatttctcgcctgtcaccgatttccgcgaggccacgtgtcggcaattcgaggagaac
aattgcaaccgaggcgggtactgcaatttcatgcatgttaagctgattggaagggagctg
aggaggaagctcttcgggaggtaccgtgggtttaggattagccggagccggagtcggagt
ttgagcccgcgtcataaacgagagtatagggattatagagaccgggaccgtgattatcga
gggaatgggaagcgatcgagcagggacaggtatgatagggatggtggtggtggtggtgga
cggagaaggcatggtagcccgaggcggagcaggagcagaagccccgtacccgggagggaa
gggagcgaggagcggcgagctaggattgaacagtggaatcgggaaagggaggataggccg
tga

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