Carya illinoinensis (pecan): 122318416
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Entry
122318416 CDS
T08745
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122318416
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122318416
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122318416
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
122318416
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122318416
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122318416
Prokaryotic type
122318416
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
CysS_C
tRNA-synt_1f
DALR_2
HEPN
Motif
Other DBs
NCBI-GeneID:
122318416
NCBI-ProteinID:
XP_042991659
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Position
8:complement(1058216..1063126)
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AA seq
560 aa
AA seq
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MATLLKFCRPFCPIRFPNLTRKIRLTTHLSHNTLFFNPKSGRSSLIRCTRLSSLSSSQPS
ELWLYNTMTKNKQVFEPKLEGQVGMYVCGVTAYDLSHIGHARVYVTFDILYRYLRHLEYE
VRYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFCQDMLHLHCLPPSVEPRVSDHMLQ
IIDMIKQILDNGYAYRVDGDVYFNVYKFPEYGRLSGRKLEDNRAGERVAVDSRKKNPADF
ALWKAAKEGEPSWESPWGFGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQ
SCAACKESNIRYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSP
INYSDVQLESASDRIFYIYQTLHDCVNVLSQNDAAVRVDLIPPDTANCINNFQNIFVDSM
SDDLHTPVVLAAISDPLKTINDLLHTRKGKKQEFRIESLGALEKTIKTVLTVLGLVPTSY
SEVLQQLREKALKRAKLTEDQVLEKIEERTAARRNKEYEKSDVIRKELAAVGIALMDSAD
GTTWRPAVPLALQEEKVTAT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctacgctcctcaagttttgcagacctttctgccccatccgtttccctaacttgacg
cggaagattcgactcaccactcacctctcccataataccctcttcttcaatccgaagtcc
gggaggagcagccttatccgatgcactcgtctcagttctttgagctcgtctcagccgtcg
gagctgtggctgtacaacacaatgaccaaaaataagcaagtgttcgagcccaaattggag
ggccaggtcggcatgtatgtctgtggagtcaccgcgtatgatctcagccatatcggccac
gctcgcgtctatgtcacttttgatattctctacagatatcttaggcatttggaatatgaa
gtccgttatgttcggaatttcaccgacgtggacgacaagataattgctcgggcaaatgaa
ttgggggaggatccaatcagtttgagcagacgctactgtgaagagttttgtcaagatatg
ttgcatcttcattgcctgccaccttctgttgaaccacgagtatcagatcacatgcttcaa
atcattgatatgatcaagcagattcttgataatggatatgcctatagagttgacggggat
gtttacttcaatgtatacaagtttccagaatatggacgattatctgggcgaaaactagag
gataatcgagctggtgaacgagttgctgtcgactcaaggaagaaaaatccagctgatttt
gctttatggaaggctgcaaaggaaggagagccatcttgggagagcccatggggttttgga
agacctgggtggcatattgagtgtagtgccatgagtgctgcttatctgggttactctttt
gacattcatggtggaggaatggaccttgtgtttccccaccatgagaatgaaattgctcag
agctgtgctgcatgtaaagaaagcaatataaggtactggatacacaatggctttgtcact
gttgactccgagaaaatgtccaaatctcttgggaacttctttacaatacggcaggttata
gacctttaccatccactggctttgagacttttcttgatggggacccactaccgatctcca
atcaactactctgacgtacagcttgagagtgcttcagatcgtattttctacatttatcag
acattgcatgattgtgtaaatgttctaagccagaacgatgcagctgttcgagtggatctt
atcccaccagatactgcaaattgcatcaataacttccaaaacatttttgtggattcaatg
tcagatgaccttcacactcctgttgttctggctgcaatatctgacccactgaagactatc
aatgatctcctgcatacgcgtaaggggaagaagcaagagtttcgaatagaatcacttgga
gctttggaaaagacaatcaagactgttctgactgttttaggactagtgcccacaagttac
tcagaggttttgcagcagcttagggaaaaagctttgaagcgtgctaagttaactgaagac
caagttttggaaaaaatagaagaacggacggcagcaagaagaaacaaggagtacgaaaaa
tcagatgtaattaggaaagagttagctgctgttgggattgctcttatggacagtgcggat
gggactacttggagaccagcggttccacttgcactccaagaggagaaagtgacggcaact
tga
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