Carya illinoinensis (pecan): 122318445
Help
Entry
122318445 CDS
T08745
Name
(RefSeq) LEC14B protein isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122318445
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122318445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR54
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
122318445
NCBI-ProteinID:
XP_042991731
LinkDB
All DBs
Position
8:complement(13854151..13862042)
Genome browser
AA seq
534 aa
AA seq
DB search
MRSTSSYVGERGTAYQNLKIKPTKANCITNKNEKYEISLYLSLREPKSSTAQRAAVNEMG
YAMSRLEIEADLRDGRNTIHEDGNNQRPNKPLTHLDHEIAYLTRLKSGPHKRLSQVIPGR
QELTVSTVKMLAGRECNYSGRGRFSSADCCHVLSRYLPVNGPWLVDQLTSRAYVSQFSAD
GSLFVAGFQGSHIRIYNVDRGWTVQKNILAKSLQWTVTDTSLSPDQRHLVYASMSPIVHI
VNVGSPETESLANVTEIHEGLDFSANDDGGYSLGIFCVKFSTDGREVVAGSNDDSIYVYD
LEANKLSLRILAHKSDVNTVCFADESGHLIYSGSDDALCKVWDRRCFVARDKPAGVLMGH
LEGITFIDSRGDGRYLISNGKDQTIKLWDIRRMSSSVPCNSVFRSYEWDYRWMDYPPQAR
DLKHPCDQSVATYRGHSVLQTLIRCYFSPEYSTGQKYIYTGSHNSCVYIYDLVSGAQVAT
LKHHKSPVRDCSWHPYYPMLVSSSWDGDVVRWEFPGIGEAPTSSSRRRVRRRHI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccacttccagctacgtaggggagcgtggaaccgcttaccagaacctaaagatc
aaaccaacaaaagccaactgtataaccaacaaaaatgagaagtacgaaatctccctgtat
ttgtctctccgagaacctaaatcctcgacagctcagagggctgcagttaatgaaatgggt
tatgcaatgagtagactagagatagaagcagacctccgcgatgggaggaataccatccat
gaagacggtaacaaccaaagacccaacaagccattgacacatttagaccatgagattgcc
tatctcacgaggttaaaatcaggaccccacaaacggttaagccaagtcatacctggcagg
caagagttaacggtttccacagtgaagatgttggctggtcgagagtgtaattattcagga
agggggagattctcatcagccgattgttgtcatgtcctaagcagatatctgccagtaaat
ggtccttggctagttgaccaactgaccagccgagcatacgtctcacagttttcggctgat
ggttccctttttgttgccggatttcagggaagccacataagaatatacaatgtggaccga
ggatggacggttcagaagaacattcttgcgaaaagtttgcaatggacagttactgataca
tctctttcgccagatcaacgccatcttgtttatgctagtatgtcacctattgtccatatt
gttaatgttgggtcccctgaaacagagtctctagcaaatgttacggagatccatgaaggt
ttggatttttctgctaatgatgatggaggatactctttgggaatcttctgtgtcaaattt
tcaacagatggacgagaagttgttgctggaagtaatgatgactccatttatgtttatgat
cttgaagcaaataagctttctctcagaattttggcacacaagtctgatgtgaacactgta
tgttttgccgatgaaagtggccatctcatttattctgggagtgatgatgctctctgtaag
gtgtgggacagacgttgctttgttgctagagataaaccggcaggcgtgcttatgggacac
cttgaaggaattacatttatcgacagccgtggagatggtcgttatttaatatcaaatgga
aaagatcagaccataaaactttgggatatccggagaatgtcttctagtgtcccatgcaat
tcagtatttaggagttatgaatgggactacagatggatggactacccaccgcaggcaaga
gatttgaaacacccatgtgatcaatcagttgctacatatagaggtcattcagtcttgcaa
actcttattcgctgctacttctcccctgaatacagcactggtcaaaagtacatctacact
ggatctcacaattcatgtgtttatatatacgatttggtgagtggagcccaagttgcaaca
ctcaagcaccataaatcacctgtaagagactgtagttggcacccttactaccctatgctt
gttagctcctcttgggatggggatgttgtcagatgggaatttcccggaattggtgaagca
ccaacctcctcaagcaggaggagagttcggaggagacacatttaa
DBGET
integrated database retrieval system