Carya illinoinensis (pecan): 122318491
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Entry
122318491 CDS
T08745
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122318491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122318491
Spliceosome [BR:
cill03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
122318491
Complex B
122318491
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
122318491
NCBI-ProteinID:
XP_042991821
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Position
8:complement(13680706..13683804)
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AA seq
194 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQQVGAAFNQHLMGQRPRLPVLPTPMMPQLPGSSPLLPGIRPPVLPRPVPGAPGYAP
MMAPPGAPSLPGQLNAIPRPPVSATTVPGSTAATASNGAPPMATLPFYQANPVVSTSGGY
DSLNSNAQAPEANH
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgtgattactgtgacacctacttgacccacgactctccatctgta
agaaagcagcacaatgcaggttacaagcataaggcaaatgttcggacatactatcagcaa
tttgaggaacaacagacacaaagcttgatcgaccagaggattaaagaacatcttgggcaa
gctgcagcatttcagcaggttggtgctgcttttaatcagcatctaatgggtcagaggcct
cgacttcctgttctccctacacccatgatgccacagttacctggaagttcaccactactc
ccagggattaggcctcctgttttgcccagaccagttcctggagctccagggtatgcgcct
atgatggctccacctggtgctccttccttacctggtcagttgaatgctattcctaggcct
cctgtgagtgcaacaacggttcctggaagcacagcagcaactgcttccaatggtgccccg
cctatggcaacactgccattttatcaggccaatccagtggtatcaacaagtggaggctat
gatagtctcaattccaatgcccaagctcctgaggctaaccattag
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