Carya illinoinensis (pecan): 122318590
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Entry
122318590 CDS
T08745
Name
(RefSeq) YTH domain-containing protein ECT1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122318590
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122318590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
122318590
NCBI-ProteinID:
XP_042992027
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Position
8:168191..178709
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AA seq
634 aa
AA seq
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MDASLQERARIVSTGERPVKPDNMTPQPLTPKDERIVSANPSPDATIIGQSRDVPEQQGS
SEAAGDLSTIHSLNAYVSHEQNISFGGPGSSTGFWDGYSQYINTDGMHVVSPVIYNDNPS
VVFHSGYGFNHEMPYGQYSPIATPLSSLMVDGQLYSPQQVPFSPSYYAQATAPSLPHMSS
AISISPADLMLPENSSIDTMLFGPGSGYLASFGPFAGGNLSGNLGSSPLASPAAYPQPMG
ILGSYEHNVGQISQQQRPMHGYGLVSSSFSGFYPHGSSNQSSTFGGASISYPVTNDRNRL
TLDKGRRRDRDRGSAGIYNDSQDIFNDRNRGPRASKPKSRSATEQGSSSVISKNVSPTSR
IHLDSYNQLDFVTDYKNAKFFIIKSFSEDNVHKSVKYNVWASTPHGNKKLNAAYHEAKEM
KGNCPVFLLFSVNGSGQFCGVAEMGGPVDFDKDADYWQQDRWSGQFPVLWHIIKDVPNVR
FRHILLENNDNKPVTHSRDSQEVNLEEGIEMLKIFKDYNAQTSILDDFDFYDERERTFTE
KKAKQACSTADVPDSVVDESVKEISDSLGQARKLEVSSNEVPAAEQGGSSRADATISFSH
DAMNQTSDCLSRVLRLEESCNEAQESETGGGHEI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctctctgcaagaacgggcccgaatcgtctccaccggagagaggcctgttaag
ccagataatatgacaccgcagccacttacgcccaaagatgaaaggattgtgtcggcgaat
ccttctccggatgcaaccatcataggacaatcaagggatgtacctgaacaacaaggatct
tcagaagcagctggagatttgagcactatccattcactcaatgcttatgtttcccatgaa
caaaatatatcatttggtggtcctggtagtagcactggattttgggatggatattcccag
tatattaatactgatggcatgcatgttgtatcaccggtcatctacaatgataatccatct
gttgtgtttcattctggttatggcttcaatcatgaaatgccatatggacaatattctccc
attgctacacctctgtcatctttaatggtggatggccagctgtactctccacagcaagtc
ccattttctccctcttattatgcacaagcaactgctccaagtttgcctcatatgtcttca
gctatttcaatttcaccagctgacctgatgttgccagaaaatagtagcattgacacaatg
ctttttgggcctggatcaggctacttggcaagttttggaccatttgctggaggaaacctt
tcagggaatcttggttctagtcctcttgcatctccagcagcttatccccaaccaatgggc
atacttggatcatatgagcacaatgttggtcagatttcccaacaacagagaccaatgcat
ggatatggcttagtatccagttcctttagtggattttacccacatggtagttctaatcag
agctctacctttggtggtgcttcaatttcttatccagtcactaatgatcgaaatcgtcta
actcttgacaagggaagaagaagagacagggaccgaggctcagctggcatttacaatgat
tcacaggatatcttcaatgaccgtaatcgtggtccaagggcttcaaagccaaagagcagg
agtgccactgaacagggctcctcgtccgtcattagcaaaaatgtttcacctacttctaga
attcatcttgattcatacaaccagctagattttgtcacagattacaagaatgcaaaattt
tttataatcaaatctttcagtgaggacaatgttcataaaagtgtcaaatacaatgtttgg
gccagcacaccgcatggaaacaagaagctaaatgctgcttatcatgaagcaaaggagatg
aaaggcaactgtccagtattcctattgttttcagttaatggtagtggacagttctgtggg
gtagctgaaatgggtggacctgtagattttgataaggatgcagattactggcagcaagat
agatggagcgggcagtttccagttctgtggcacatcatcaaagatgtccccaacgttcga
ttccgacacattctacttgaaaataatgataataagcctgttactcacagccgagattct
caggaggtcaacctggaagagggtattgagatgttgaaaattttcaaggattacaatgca
cagacatctatcttagatgattttgatttttatgatgagagagagagaacctttacagaa
aagaaggccaaacaagcttgttcaacggcagatgttccagattctgttgtggatgagtcc
gttaaggaaatatctgatagtttgggtcaggcacgtaagctggaagtgagtagtaatgaa
gtaccggcagccgaacaaggtggtagctcaagagcagatgctacaatctcattttcccat
gatgccatgaaccaaacatctgattgcttgtcacgagtattacggttggaagagagttgc
aatgaagcacaggaatctgaaacgggtggtggacacgagatttga
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