Carya illinoinensis (pecan): 122318735
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Entry
122318735 CDS
T08745
Name
(RefSeq) LOW QUALITY PROTEIN: proline--tRNA ligase, cytoplasmic
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122318735
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122318735
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122318735
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
122318735
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122318735
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122318735
Prokaryotic type
122318735
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GFIT
Motif
Pfam:
HGTP_anticodon
ProRS-C_1
DUF2096_N
Motif
Other DBs
NCBI-GeneID:
122318735
NCBI-ProteinID:
XP_042992252
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Position
8:complement(9984477..9995336)
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AA seq
358 aa
AA seq
DB search
MANDDVKKSNANASGGGKKKEVKKETGLGITNCKDENFGEWYSEVVVNGELIEYYDISGC
YILRPWAMSIWETMQKFFDAEIKKMNIQNCYFPLFVSPGVLQKEKDHVEGFAPEAFIPNN
GRGIQGATSHCLGQNFAKMFETNFENEKGEKGMVWQNSWAYSTRTIGVMVMVHGDDKGLV
LPPKVATVQVIIIPVPYKDADTRGIFDACASTVDILSGAGIRAKADFRDNYSPGWKYSHW
EMKGAPLRIEIGPKDLANSXVRAVHRDNSLKIDISRTNLVEQVKEMLNNIQHSLFDVAKQ
KRDACVKTIQTWDEFVEALSQRKLILALWCDEEEVEKDVKARTKGEIGAAKSLCSPFD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgatgatgtgaaaaagtctaatgctaatgccagcggtggagggaaaaagaaa
gaggtgaagaaggaaacgggtttaggaataaccaattgtaaagatgagaattttggggaa
tggtattctgaggtagttgtcaatggagaattaattgagtattatgatatctcgggctgt
tatattctgagaccgtgggcaatgtcgatctgggagaccatgcaaaaattctttgatgct
gaaataaagaaaatgaacatccagaactgctacttcccactttttgtttctccaggcgta
ttgcagaaggagaaggatcatgtggagggttttgctcctgaggcatttattccgaacaat
ggtcgtggtatacaaggtgcaacttcacattgtttgggtcaaaattttgccaaaatgttt
gagacaaactttgaaaatgaaaagggagagaagggtatggtttggcagaactcgtgggcc
tatagcactcgtacgattggtgtgatggtaatggttcatggggatgataaaggcttggtg
ctgccacctaaagtagcaacagtccaggttattataattcctgtgccgtacaaggatgct
gatactcggggaatatttgatgcctgtgcttctacagtggatatcttgtctggggccggt
attcgtgctaaggcagactttagagataactactctcctggttggaagtactcacattgg
gaaatgaaaggtgctcctctaaggattgaaattgggccaaaagacttagctaatagttag
gtacgagctgttcatcgtgataattcattgaaaatagacatctctagaaccaacttggtt
gagcaagtgaaagaaatgcttaataatatccaacatagcctatttgatgttgcgaaacaa
aagcgagatgcatgcgttaagaccatacaaacttgggatgaatttgtggaagcactcagc
caaaggaaattgatcttagctctttggtgtgatgaggaggaggtggagaaagatgtgaag
gcaaggacaaaaggtgagattggagcggctaagagcctttgttccccatttgactag
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