KEGG   Carya illinoinensis (pecan): 122318795
Entry
122318795         CDS       T08745                                 
Name
(RefSeq) cyclin-H1-1-like
  KO
K06634  cyclin H
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03022  Basal transcription factors
cill03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122318795
  09124 Replication and repair
   03420 Nucleotide excision repair
    122318795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cill03021]
    122318795
   03400 DNA repair and recombination proteins [BR:cill03400]
    122318795
Transcription machinery [BR:cill03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     122318795
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     122318795
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B IFT52_GIFT Eaf7 CRIC_ras_sig
Other DBs
NCBI-GeneID: 122318795
NCBI-ProteinID: XP_042992361
LinkDB
Position
8:complement(34638836..34648797)
AA seq 337 aa
MADFLTSTHRAKWIFTPQELVEKYKASNQRAIQALEKYGATLMEVDADGSLSYPEPPMNP
KDTADKHSRPKPLNIEEEQYMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
EHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQLILNNEMIVYQSLEFDLIVYAPY
RSIDGFLNDMEEFCQVKDDQLHMLKALHETARMEVDKIMLTDAQLLFPPGQLALAALRCS
NGVHQVIDFERYLRNILSRQSSAHNVSELIESLNAIDSWVKRYKFPSEKDLKHINRKLKS
CWGLSSNDESKKREKKSKHKSKKSSNETQNVLSLTES
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggccgatttcctgacctcgactcaccgagctaagtggatcttcactcctcaagagcta
gttgaaaaatacaaagcctctaatcaaagagcaatacaagcactagagaagtatggagca
acgcttatggaagttgatgctgatgggtcattatcatatcccgaacctccgatgaaccca
aaagatactgccgacaagcattctcgtccaaaaccccttaatattgaggaagagcagtat
atgcgagtgttctacgagaataaacttcaagaagtttgtaacaacttccactttcctcat
aaaattcaggcaacagctcttatatattttaaaagattttaccttcaatggtcggtcatg
gaacatcacccgaaaaacattatgttaacgtgcatatatgcagcttgtaagatagaagaa
aatcatgtttcagcagaggagcttggtaaggggatctcgcaggaccatcaattgattctc
aataatgagatgatagtttatcagagtttagaatttgaccttattgtttatgcaccgtac
cgctcaatagatggttttctgaatgacatggaggaattctgccaagtgaaagatgaccag
cttcatatgctaaaggctttacacgaaactgcaaggatggaagttgacaaaatcatgctc
actgatgcacaacttctattccctcccgggcagttagcattggctgctttgcgttgttca
aatggggtgcaccaagttattgactttgagagatacctgaggaacatcctctctcgtcag
agttctgcacacaatgtttcagagctcattgaatcactaaatgcaatagattcttgggtt
aagagatataaattcccttcagaaaaagatttgaagcacattaaccggaaactgaaatct
tgttggggtctcagctcaaatgacgagagtaagaaacgggagaagaaatcaaagcacaag
tcaaagaaaagttcaaatgaaacacaaaatgttctttctcttactgaatcgtaa

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