Carya illinoinensis (pecan): 122318820
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Entry
122318820 CDS
T08745
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122318820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122318820
03041 Spliceosome [BR:
cill03041
]
122318820
03032 DNA replication proteins [BR:
cill03032
]
122318820
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
122318820
Spliceosome [BR:
cill03041
]
Complex A
U1 snRNP components
Sm proteins
122318820
U2 snRNP components
122318820
Complex B
U1 snRNP components
122318820
U4/U6.U5 tri-snRNP components
122318820
Complex C
U2 snRNP components
122318820
DNA replication proteins [BR:
cill03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
122318820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
122318820
NCBI-ProteinID:
XP_042992398
LinkDB
All DBs
Position
8:complement(3923119..3930949)
Genome browser
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQRDLRIEGRIIGFDEYMNLVLDDAEEV
NVKKKSRKSLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaccaaagttcagaggatcatgacccaacccattaacctgattttcaggttt
cttcagagtaaagctcgtattcaaatatggctttttgagcagcgggacctgaggattgag
ggcagaattattggttttgatgagtacatgaatttggttctggatgatgctgaggaagtc
aatgtcaagaagaagagtagaaaatctctagggcgcattcttcttaagggagacaacata
actctgatgatgaacacgggaaaatga
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