Carya illinoinensis (pecan): 122318954
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Entry
122318954 CDS
T08745
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122318954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122318954
04147 Exosome [BR:
cill04147
]
122318954
04090 CD molecules [BR:
cill04090
]
122318954
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122318954
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122318954
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122318954
CD molecules [BR:
cill04090
]
Proteins
122318954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
RsgA_GTPase
Zeta_toxin
ABC_ATPase
AAA_16
AAA_21
AAA_15
AAA_30
AAA_24
AAA_25
AAA_7
DUF815
YobI-ATPase
P-loop_TraG
DLIC
nSTAND3
Motif
Other DBs
NCBI-GeneID:
122318954
NCBI-ProteinID:
XP_042992667
LinkDB
All DBs
Position
8:complement(10189575..10197051)
Genome browser
AA seq
1290 aa
AA seq
DB search
MEMENGLNVGTTTTHEGAELKNNVEKAENNSPNVIGDREDFEKSTGGDHQNSKTVPFLKL
FSFADSTDVFLMIAGTMGAIGNGSGLPLITVFFGEMINSLGSTTDIVPLVSKVCLKIVYL
GIGVGAGGFIQVACWMITGERQTARIRGLYLKAILRQDVAFFDNETNTGEVVGRMSGDTV
LIQDAMGEKVGKFLQLMSTFIGGFVVAFSKGWLLTLVMLASFPLLVATGALMSMVIAKTA
SRGQAAYANAANVVEQTISSIRTVVSFNGEKQAVMNYERFLKTDYKAGVHEGLVSGLGFA
AFKLVVFGSFAMAVWFGSKLILNKGYNGGDVLNVITAVLTGSASLGETSPCINAFVAGQS
AAYKMFKTIERKPKIDTYSTKGKILDDIHGDIELRDVFFSYPARPNEQIFSGFSLYINRG
TTSALVGQSGSGKSTVISLIERFYDPQAGEVMIDGINLKDFRLKWIRQKIGLVSQEPVLF
ASSIKDNIAYGKDGTTFEEIRVATELANAAKFIDKLPQGLDTVVGGHGMQLSGGQKQRIA
IARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAV
IQQGKIVEKGSHSELINNPNGAYSQLIHLKEVNKESEQASDDQNRSEITAESSRHSSLRY
SQRMSHLRSISQGSSVNSCTFGLPIEVLIPDDTWTEPEEKFPKVLIRRLAYLNKQEIPIL
LLGAIAAILNGTLFPIFGMLLSKVIKSFYEPPHKLRKDTNFWSIIFVILGVVSFLAIPAR
AYLFSVAGCKLIQRVRLMCFEKLVHMEVGWFDKPEHSCGSIGARLSADAARVRALVGDSL
GQILDVIASAVAGLVIAFVGSWQLAIIILALIPLIGINAYAQLKFMKGFSADAKMMYMEA
SQVANDAVGSIRTVASFCAEEKVMNLYISKCESPRKAGIKQGLITGTGYGTSFGLLFLAY
ATFFYAGAQLVQARKATSSDVFQVFFALTLAATGVSQTSSMGPDTGKAKNAVSSIFAIID
QQSKIDASDESGITLDNFKGEIEFLHVSFKYPCRPDVQIFHDFSLTIHSNKTIALVGESG
SGKSTVISLLQRFYDPDSGHIKLDGIEIQKFQVKWLRQQMGLVSQEPVLFNDTIRANISY
GKEEGNATETEIIDVAELANAHSFISGLQKGYDTIVGERGVQLSGGQKQRVAIARAMIKS
PKILLLDEATSALDAESEKVVQDALNIIRVNRTTVVVAHRLSTIKNADVIAVFKNGVIVE
KGRHENLIKNKDGFYASLVSIHTSTNASTA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaaaatggcttgaacgtcgggacaacaaccacgcatgagggagccgaacta
aaaaacaacgtagaaaaagctgagaataatagcccgaacgtgatcggtgatcgagaagac
ttcgaaaagagtaccggaggagatcatcagaattccaaaactgttccatttcttaagctt
ttctcgtttgcagattccactgatgttttcttgatgattgctggtacaatgggtgccatt
ggaaatggctcaggtctgccccttataactgtattcttcggggaaatgattaatagtttg
ggaagtactacagatattgttcctttagtttccaaggtctgtctaaaaatagtctacctg
ggcattggggttggtgccggaggattcatccaggtggcttgttggatgatcacaggggag
agacaaactgcgagaatacggggtttgtacttgaaggctattttgagacaagatgtggct
tttttcgataatgaaacgaacactggagaggtggttgggaggatgtctggtgacactgtt
ctgatacaagatgccatgggtgagaaggttgggaaatttctgcagctgatgtcaacattc
attggaggttttgttgtggcattttccaaaggctggcttcttacccttgtcatgttggcc
tcatttcctcttcttgtggcaactggtgctcttatgtcaatggtcatagctaagacagct
tcccgtggacaagctgcttatgcaaatgcagcaaatgtggttgaacaaacaatcagttca
atcagaacagtggtatcatttaatggggagaaacaagccgtaatgaactatgaaaggttc
ctaaaaacagattacaaagctggtgttcatgaaggcttggtttcagggttaggttttgcc
gcctttaagttagtagtatttggcagctttgctatggcagtatggtttggatcgaaattg
atactgaataaaggatacaatgggggtgatgtgctgaatgtgattacggctgtattgact
ggatctgcgtccctaggcgagacatctccctgcataaatgcctttgttgcgggtcaatct
gctgcatataagatgtttaagactattgagaggaagccaaagatagatacgtatagcaca
aagggaaagattttggatgatattcacggagatattgagttgagagatgtctttttcagt
tatccagccagacccaacgagcaaatattcagtggattctctctttatatcaatagaggc
acaacttcagctttggttggacaaagtggaagtgggaagtcaacagtgataagtctaata
gagagattctatgatccacaggctggagaagttatgatagatggcattaacctcaaagat
ttccgtcttaaatggattaggcagaaaattggtcttgttagccaagaacctgtgttgttt
gcatccagcattaaggataatattgcatatggaaaggatggtacaacctttgaagagata
agagttgccactgaacttgcaaatgctgctaaatttattgataaattgcctcagggacta
gataccgtggttggtgggcatggaatgcagctatctggtggtcagaagcagagaattgcc
attgcaagagcaattctaaaagacccacgaattttacttctggatgaagctacaagtgca
cttgatgcagaatctgagagaattgtgcaggaggcattggacaggatcatggtcaatcga
actaccgttattgttgcccatcgtttgagtacagtcagaaatgctgatatgattgcagtc
attcaacaaggaaagatagttgaaaagggatcacactcggaactaatcaacaatcctaat
ggagcatactcgcaactcatacacttgaaagaagtaaacaaggagtccgaacaggcatca
gacgatcaaaacagatcagaaattactgctgaatcttctagacactcaagtctgagatac
agtcaaagaatgtcacacctaagatctataagtcagggatcatcggttaatagttgcacc
tttggattgcccatagaagtcctcatccctgatgatacgtggacagaaccagaagaaaag
tttccaaaggtcttaatccgccgtctcgcctaccttaacaagcaagagattcctattctt
cttcttggggctatagctgcaatcctaaatggcacattatttcctatatttggtatgctg
ctctccaaggtaatcaaatcattttacgaaccacctcataaactgagaaaggacacaaat
ttttggtcaattatttttgtgatccttggtgtggtatcgtttcttgcaattccagcacga
gcataccttttttctgtggccgggtgcaagttaattcaacgtgttagattgatgtgtttt
gagaagttggttcacatggaggttggttggtttgataagcctgagcactcatgtggctcg
attggtgctaggctttcagcagatgctgctagagtgcgagctcttgttggagattcactt
ggtcagattcttgatgttattgcttcagcagttgcaggtttagtcattgcatttgttgga
agttggcagttggcaattattatccttgcattgattcctctgattggtatcaatgcatat
gctcaattaaagttcatgaaaggattcagtgcagatgcaaagatgatgtacatggaagca
agccaagttgccaatgatgcagttgggagcataagaacagtcgcttctttttgtgctgaa
gagaaggtgatgaatttatacataagcaaatgcgaaagcccaaggaaggctggaataaag
caaggcttgatcactggaacaggatatgggacatcttttggcttgttgtttcttgcctat
gctacctttttctatgcaggagctcaattggttcaagcaaggaaagcaacatcctcagat
gttttccaagttttctttgctttgaccttggcagccacgggagtctctcaaacaagctcc
atgggtccagatactggcaaagccaagaatgctgtttcttccatatttgcaataatagac
cagcaatcgaagatagatgcaagtgatgagtctggtataactttagacaatttcaaggga
gaaattgagtttcttcatgtaagctttaagtatccatgcaggccagatgttcagattttc
catgacttcagcttgactatccattctaacaagacaattgccttggttggagaaagtggg
agtgggaaatccacagtcatttcattgctgcaaaggttttatgatcctgattctggtcat
attaaacttgatggaattgaaattcaaaagtttcaagtgaagtggctgaggcagcaaatg
ggtctcgtgagtcaagaaccagttttgtttaatgacactattcgtgccaacatttcatat
ggaaaggaagaaggaaatgcaacagagacagaaattatagacgtagcagagttggcaaat
gctcatagcttcattagtggcttacaaaagggttatgatacaatagtaggagagcgtgga
gtccagttgtccggtgggcagaagcaacgagtagccattgcacgagccatgattaaaagt
ccgaagatattactgttagatgaggctaccagtgcactggatgccgagtctgaaaaagtg
gttcaagatgcattaaacataattagggttaacaggactacggtggtggtggctcatcga
ttatccacaatcaagaatgctgatgtaatcgcagtttttaaaaatggagttattgtagag
aaagggagacatgagaatttgattaaaaacaaggatggcttttatgcctcattggtttca
attcacaccagtactaatgcttcaactgcctag
DBGET
integrated database retrieval system
