Carya illinoinensis (pecan): 122319042
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Entry
122319042 CDS
T08745
Name
(RefSeq) peroxisome biogenesis protein 12 isoform X1
KO
K13345
peroxin-12
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122319042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122319042
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
122319042
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-RING_UBOX
NinF
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
122319042
NCBI-ProteinID:
XP_042992840
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Position
8:complement(23235723..23253515)
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AA seq
393 aa
AA seq
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MLFQVGGQGARPTFFEMAAAQQLPASLRAALTYSFGVLALRRPFLHRVLDYEDEFYALLM
LVLETHSLRTTDASFSESLYGLRRRAVKIQAKKDDAQSSSGDGIHHSGLEKRQKVLSVVF
LVVFPYLKSKLYSIYNKEREARLQASLWGHGDERFDGTDYIDGGEVSPVSRGNLDRDVSV
RTRLMTRIHKIIGACYPWLHASSEGASFAYQLLYLLDATGFYSVGLHALGIHVCRATGQE
LMDTNSRISKIRNHERERLRGPPWLKALQGALLSCMYTALDYAQTGLIAAVFFFKMMEWW
YQSAEERMSAPTVYPTPPPPPLPKVAEEGIPLPPDRTICPLCSQKRANPSVVTVSGFVFC
YTCIFKYVSQYKRCPITLMPAHVDHIRRLFHDI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaggtaggaggacaaggggctcggcccactttcttcgagatggcagcggct
cagcagctccccgccagcctgcgcgccgctcttacctattctttcggcgtattggcctta
agaagaccctttctccacagggtgttggactatgaagatgaattttatgctttgctgatg
ctggttcttgaaactcatagtttacgaacaacagatgcgtccttctctgaatctctatat
ggcttacgaaggagagctgtgaagatacaagccaagaaagatgatgctcaatcgagctca
ggtgatgggattcatcactctgggttagaaaagcgtcaaaaggtcctttcagttgtgttt
ctggttgtatttccttatttgaagtcaaagttatattcaatatataataaagaaagggaa
gccaggcttcaagctagtttatggggtcatggtgatgaaagatttgatggtactgactat
attgatggaggggaagtttctcctgtttcaagaggaaatttggatagagatgtgtcggtt
agaacacgtttgatgacaagaattcacaaaattataggcgcatgttatccatggttacat
gctagtagtgaaggagcatcatttgcttatcagctgttatatttgttggatgctactggc
ttctattccgttggactgcatgcactggggattcatgtttgtcgagctacaggacaagag
ctgatggatactaattccagaatttcaaagataagaaaccatgaacgtgaaagacttcgt
ggcccaccatggctgaaggcattacaaggagcactcctcagttgtatgtatactgcgctt
gattatgcacaaacagggttaattgcagcagtgttctttttcaaaatgatggaatggtgg
taccaatctgctgaggagagaatgtcagctccaactgtgtaccccacgccaccaccacct
cctctgccaaaggttgctgaagagggtattccactgccacccgatagaacaatttgtccc
ttgtgctcgcagaagcgtgcaaatccatctgtagttaccgtttcagggtttgtcttctgc
tacacgtgcatatttaagtatgtttctcagtataaaagatgcccaatcacattaatgcct
gcacatgttgatcatataaggaggctctttcatgatatatag
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