Carya illinoinensis (pecan): 122319082
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Entry
122319082 CDS
T08745
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122319082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122319082
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122319082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122319082
NCBI-ProteinID:
XP_042992903
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All DBs
Position
8:5669008..5672306
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AA seq
330 aa
AA seq
DB search
MDSDEAKLFVGGISRVTSEVILRKHFDKYGTVLGSSIAKDRITKNSRGFGFVWFSDSSAA
HKALQDSHVILGKTVEVKKAIPRSEQQQHQNQQQNGGSSKGSSIDNGENQFRTKKIFVGG
LSASLTEEEFKNYFGKFGSVTDVVVMHDSTTHRPRGFGFITFDSAESVVNVMKNSFHELN
GRLVEVKRAVPKEVNNGSDSGFNTRMEGGIGPSFSYSPYRPGYWVLPSYAPFPGFGGGGG
SPYGASIYGGWYPIGGSGSIGSGISPLAPRSPWYGTTVIGAGALPLPQSRASVNTAYLSG
GVGVMGMAAGGYSGIVGQRELEAESGSLWQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggactcagatgaagccaagctcttcgtcggaggaatttctcgggtgaccagtgaagtc
attttgaggaaacatttcgacaaatacggtacagtattgggctcctccattgcgaaggac
cggatcaccaagaattctagagggtttggattcgtctggttctccgactcatctgctgct
cataaagcccttcaagactcgcatgttattctgggaaaaacggtagaagtcaaaaaagca
atacccaggagtgaacaacagcaacatcaaaaccaacagcagaatggaggatcaagtaag
ggtagtagtattgacaatggcgagaaccaatttaggactaaaaagattttcgtaggaggt
ttatcagctagtttaaccgaggaagagtttaagaactactttgggaagtttggtagtgtt
acagatgtagtggtgatgcatgacagcacaacccatcggcctaggggttttggctttatc
acatttgattcagcggagtctgtggtgaatgttatgaagaatagcttccatgagctaaat
ggtaggcttgtggaggttaagagggctgtcccaaaagaggtaaataatggtagtgacagt
ggttttaacacaagaatggagggtggaatagggccttctttcagttattctccttataga
cctggatattgggttctcccaagttatgcaccttttcctgggtttggtggtggtggaggc
tctccctatggagcaagcatttatggtggttggtaccctattggaggatctggtagcatt
ggttctggtatttctccacttgctccaagaagtccttggtatggcaccactgtgattggt
gccggggcattaccgttgcctcagagcagggcttctgttaatactgcatacttgagtggt
ggggttggagttatgggtatggctgctggtgggtacagtgggattgttggacaaagagaa
ttagaagctgaatcaggctctttgtggcaatga
DBGET
integrated database retrieval system
